| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241996
Identifier: 148241996
GI number: 148241996
Start: 814368
End: 815897
Strand: Direct
Name: 148241996
Synonym: SynRCC307_0897
Alternate gene names: NA
Gene position: 814368-815897 (Clockwise)
Preceding gene: 148241995
Following gene: 148241998
Centisome position: 36.6
GC content: 62.09
Gene sequence:
>1530_bases ATGACAAGCGGTCCTGCAGCCGAGCAGCTCAGGAGCTACTTGCATCAAACCCGTCTGCTGAATTCGATCAGCAGCGCGCT GTATTTCGATCAAAACACTGTGATGCCAGCGGCTGCAGCCAGCTGGCGCGGTGATCAATTGGCCCTGCTGGCAGCTCAAG CGCACCAGCGTCAGAGCTGTCAGGACTATGGCGATCTATTGGAGGCCGCTGAAGCTGAAGCCACTGGCGCCAGTCAGTCC AGTGCTGATATCGCTCATCAGCGCAACCTGGCGTTGCTGCGCCTGCAGTTGGAGCGCAACCGCTGCCAAGACAAGGAGCT TGTCGCTGCGTTGGTGCGCGCCCAATCCCATGGCAATGCCGTTTGGCAGGAAGCCAGGCGGCTGAACGACTTCAGCCTGT TTGCTCCGGCCCTCGAGCACATCATTCAATTGCGGCTCGAGCAGGCCACCCAGCTGAAGGCGGCTGAACCGGTTGAGCGC AGCCCTTGGGAAATCCTGGCGCAACCGTTTGAACCCGATATCAGCAAGCAGCGGCTTGAGGTGCTGTTTGATCCAATGCG GCAGCGCTTGCCGGCGTTGCTGGCGCGAGTTCCTGCCGCTAACGGGCCTTCTGCGGAGTTGCCGGAATCGCTGCAGGAGC AGCTCAGCGCTGATCTGCTCGAGAGCTGGGGTTACGACGACCAGCGCTGCCACCGCTCCCGCTCAGCCCATCCTTTCTCC TGCACCTTGGGCCCGCAGGACTACCGCATCACCACACGCGTGGTGGCCGGTCAACCCTTCTCCTGCTTTTTGGCTACAGC CCATGAATGGGGCCATTCGCTCTATGAGCAGGGCTTGCCCCACGACCAGCCCCATGCGTTCCCTTGGCCGTTGGGTGATG CCACCTCCATGGGGGTGCATGAATCCCAATCTCTGTTCTGGGAGTGCCGCGTGGCGCGCAGTGAAGCCTTCGCCCGCCGC TGGCATCCGCGTTTCTGCCTCGGTCTGGGCTCCGACCCTTGGGGCGCTCCTGAGCGTTTCTGGAAGGCGCTCAATCCCTT GCAGCCCGGCTTGATCCGCGTGGAAGCCGATGAACTCAGCTACGGGCTGCACATCGTTCTGCGCTACGAGCTGGAGCTGG CGTTATTGGAGCAGGGGCTGCCGGTGGCGGAGCTGCCGGAGCGTTGGAATCAGCGCTTTGCCGAGCTGCTGGGTCAACGG CCCAACAGCGATAGCAATGGCTGCCTGCAAGATATCCATTGGGCCGAAGGCCTCTTTGGTTATTTCCCCTCCTATGCCCT GGGCCATCTGATCAGCGCCCAGCTCAGCGAAGCCATGGAGCGAGATCTGGGATCCCTGCCCGAGCTCATTGCCAGCGGCC AAGAGCAGCAGCTACGCCAGTGGCTAGCAGCACGGGTCTGGCCCCTGGGCCGCTCGGTGAATGGGGAGCAATTGGTGCAG CAGGTCAGCGGAGAGCCGCTCAGTGCTGCTCCTTTCCTGCGTTACCTGGAAGAGAAAGTCGAGCGTTTGCTCAGCGTTGA GGCTGCGTGA
Upstream 100 bases:
>100_bases GAGGACCTGGGCAATCGCTTAGCTGAGTTGCTGCGCAGCCAAGGTGCTGGCGAGATCCTCGCCAAGATCTTTGCTGAAGC CCGCCCTGAGGCCTGATGGC
Downstream 100 bases:
>100_bases GCTCATGCAGGGCGCAGTAATCCAGCCCATCAATCGCATTGCCCTGGGCTTGCTGCAGCAGATCCAGGATTCCTTGCAGT CCTGAAGCATCCAGCCCGGC
Product: Zn-dependent carboxypeptidase
Products: NA
Alternate protein names: Carboxypeptidase Taq [H]
Number of amino acids: Translated: 509; Mature: 508
Protein sequence:
>509_residues MTSGPAAEQLRSYLHQTRLLNSISSALYFDQNTVMPAAAASWRGDQLALLAAQAHQRQSCQDYGDLLEAAEAEATGASQS SADIAHQRNLALLRLQLERNRCQDKELVAALVRAQSHGNAVWQEARRLNDFSLFAPALEHIIQLRLEQATQLKAAEPVER SPWEILAQPFEPDISKQRLEVLFDPMRQRLPALLARVPAANGPSAELPESLQEQLSADLLESWGYDDQRCHRSRSAHPFS CTLGPQDYRITTRVVAGQPFSCFLATAHEWGHSLYEQGLPHDQPHAFPWPLGDATSMGVHESQSLFWECRVARSEAFARR WHPRFCLGLGSDPWGAPERFWKALNPLQPGLIRVEADELSYGLHIVLRYELELALLEQGLPVAELPERWNQRFAELLGQR PNSDSNGCLQDIHWAEGLFGYFPSYALGHLISAQLSEAMERDLGSLPELIASGQEQQLRQWLAARVWPLGRSVNGEQLVQ QVSGEPLSAAPFLRYLEEKVERLLSVEAA
Sequences:
>Translated_509_residues MTSGPAAEQLRSYLHQTRLLNSISSALYFDQNTVMPAAAASWRGDQLALLAAQAHQRQSCQDYGDLLEAAEAEATGASQS SADIAHQRNLALLRLQLERNRCQDKELVAALVRAQSHGNAVWQEARRLNDFSLFAPALEHIIQLRLEQATQLKAAEPVER SPWEILAQPFEPDISKQRLEVLFDPMRQRLPALLARVPAANGPSAELPESLQEQLSADLLESWGYDDQRCHRSRSAHPFS CTLGPQDYRITTRVVAGQPFSCFLATAHEWGHSLYEQGLPHDQPHAFPWPLGDATSMGVHESQSLFWECRVARSEAFARR WHPRFCLGLGSDPWGAPERFWKALNPLQPGLIRVEADELSYGLHIVLRYELELALLEQGLPVAELPERWNQRFAELLGQR PNSDSNGCLQDIHWAEGLFGYFPSYALGHLISAQLSEAMERDLGSLPELIASGQEQQLRQWLAARVWPLGRSVNGEQLVQ QVSGEPLSAAPFLRYLEEKVERLLSVEAA >Mature_508_residues TSGPAAEQLRSYLHQTRLLNSISSALYFDQNTVMPAAAASWRGDQLALLAAQAHQRQSCQDYGDLLEAAEAEATGASQSS ADIAHQRNLALLRLQLERNRCQDKELVAALVRAQSHGNAVWQEARRLNDFSLFAPALEHIIQLRLEQATQLKAAEPVERS PWEILAQPFEPDISKQRLEVLFDPMRQRLPALLARVPAANGPSAELPESLQEQLSADLLESWGYDDQRCHRSRSAHPFSC TLGPQDYRITTRVVAGQPFSCFLATAHEWGHSLYEQGLPHDQPHAFPWPLGDATSMGVHESQSLFWECRVARSEAFARRW HPRFCLGLGSDPWGAPERFWKALNPLQPGLIRVEADELSYGLHIVLRYELELALLEQGLPVAELPERWNQRFAELLGQRP NSDSNGCLQDIHWAEGLFGYFPSYALGHLISAQLSEAMERDLGSLPELIASGQEQQLRQWLAARVWPLGRSVNGEQLVQQ VSGEPLSAAPFLRYLEEKVERLLSVEAA
Specific function: Releases amino acids sequentially from the C-terminus with a broad substrate specificity (except for proline) [H]
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: =3.4.17.19 [H]
Molecular weight: Translated: 57071; Mature: 56940
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSGPAAEQLRSYLHQTRLLNSISSALYFDQNTVMPAAAASWRGDQLALLAAQAHQRQSC CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH QDYGDLLEAAEAEATGASQSSADIAHQRNLALLRLQLERNRCQDKELVAALVRAQSHGNA HHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHH VWQEARRLNDFSLFAPALEHIIQLRLEQATQLKAAEPVERSPWEILAQPFEPDISKQRLE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHH VLFDPMRQRLPALLARVPAANGPSAELPESLQEQLSADLLESWGYDDQRCHRSRSAHPFS HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEE CTLGPQDYRITTRVVAGQPFSCFLATAHEWGHSLYEQGLPHDQPHAFPWPLGDATSMGVH EECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ESQSLFWECRVARSEAFARRWHPRFCLGLGSDPWGAPERFWKALNPLQPGLIRVEADELS HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHC YGLHIVLRYELELALLEQGLPVAELPERWNQRFAELLGQRPNSDSNGCLQDIHWAEGLFG CCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YFPSYALGHLISAQLSEAMERDLGSLPELIASGQEQQLRQWLAARVWPLGRSVNGEQLVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH QVSGEPLSAAPFLRYLEEKVERLLSVEAA HHCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSGPAAEQLRSYLHQTRLLNSISSALYFDQNTVMPAAAASWRGDQLALLAAQAHQRQSC CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH QDYGDLLEAAEAEATGASQSSADIAHQRNLALLRLQLERNRCQDKELVAALVRAQSHGNA HHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHH VWQEARRLNDFSLFAPALEHIIQLRLEQATQLKAAEPVERSPWEILAQPFEPDISKQRLE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHH VLFDPMRQRLPALLARVPAANGPSAELPESLQEQLSADLLESWGYDDQRCHRSRSAHPFS HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEE CTLGPQDYRITTRVVAGQPFSCFLATAHEWGHSLYEQGLPHDQPHAFPWPLGDATSMGVH EECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC ESQSLFWECRVARSEAFARRWHPRFCLGLGSDPWGAPERFWKALNPLQPGLIRVEADELS HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEHHHHC YGLHIVLRYELELALLEQGLPVAELPERWNQRFAELLGQRPNSDSNGCLQDIHWAEGLFG CCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH YFPSYALGHLISAQLSEAMERDLGSLPELIASGQEQQLRQWLAARVWPLGRSVNGEQLVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHH QVSGEPLSAAPFLRYLEEKVERLLSVEAA HHCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7765282; 1369078 [H]