| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is chpX
Identifier: 148241928
GI number: 148241928
Start: 755064
End: 756203
Strand: Direct
Name: chpX
Synonym: SynRCC307_0829
Alternate gene names: NA
Gene position: 755064-756203 (Clockwise)
Preceding gene: 148241927
Following gene: 148241929
Centisome position: 33.94
GC content: 59.65
Gene sequence:
>1140_bases ATGCCAGTCATTCCAGCCGAGCAGGTCCACGCCGGGCCCCATCCAACCCAGGAGCAGATCGTTCAAACCCTGCTCGCCGG CCAAACCCTGCTGGATGACACGCCGGATCATGTGATCCAGGTGGTCGACGTGCTCAAAAGCTATGGCGAGGTGCTGGATG CCTACAGCATCAATCTCATCTACCAAGCCGAAGAGCAGTTCCTCAATCCCTTCCCGGTTCTGAAATACCTCGACGGGGAT GTCTCGCCGGCCAAGTTGTGGCGCCATTTTTGGCACGATCGCATCAACTTTGAATACGCCGAGTACTGCATGAAGGCCAT GCTTTGGCATGGCACCGGCGGTTTGGACGAGTATCTCGATTCGCCTGAATTCGCGAGCAATTGCGAGGCGATCATTGCCT GCAAGCGCCGCCGAGATCCACTGCAAGGGCTGCTGCACCCCCTCTTCCCTCAGTTCCTGCCTGAACTGATTCGCACCGCT GCCACCACCCATGCCTTGGGGCAGTTTTGGCGGGTCATGAGCGATTTGTTCATTGACCTTGCTGAAGCCGAAGCCAACGG TGAGGTGACCTCCATCGCCGGGGTGGTGGATTTCATCCGTGATCGGCTGGTGGCCGCTGCTGGCAACCCGATCACCTACA AGGTCCGCATCGCTGGGCAAGACTTCTGGGTGCTGCCGCCTGAGGCGGGGCTTACCTTCCTGGTGGACGTGGCTGTTCCT TATGTGGAAGCCGTGTTCTTGCGCGGTACCCCGTTCCTGGGAACCGTTTCTTTCAATGCCCAGGCCAAGCAGATTTCAGC GGATCAATCGAGCTTTAAGTACGGCGCCCTCTACGCCGATCCGCTGCCGAGCATGGGCGCTGGCATCCCCCCAAGCCTTT GCATGCAAGACATGTACCGGCACCTGCCGGAACGCCTGCACAACTGGTATCAGAACTGCACCAGGGGTGAAGGCGATGTG CGCGTGAAGATCTGCCAGAGCTTCCAAAAGTCGATGTTCTGCGTCACCAACGCCGCCATCAAAGGCACCTTCCCGCACCC CCTCGACAGCACTGATCAGGCTGAACAAGAGGCCAATGCTGCCTACGCCAACGCCTGGGCGAGCAGGCTGGTCGTCGCCC GCACCAACGCCCTGGGGTAG
Upstream 100 bases:
>100_bases CCCTCTCGGTGGTGGGCCTGGGTTTGATCCCTTCGGCCCTTTCACGAATTAGTGATTCCGCCACGCAACTGATGGCGCAA CTGCCAGGAGGTATGGGCTA
Downstream 100 bases:
>100_bases GTTCCAGAAATGGACCAACCCTGGACATTGCGCAAGCGCCCAGAGCGTTTAGAGCGCCGCATTGAGTTTGCGGATTACGA GCAAACCCGCGATTTTCTCG
Product: CO2 hydration protein ChpX
Products: NA
Alternate protein names: CO2 Hydration Protein ChpX; CO2-Hydration Protein; Carbon Dioxide Hydration Protein; CO2 Hydration; High Affinity CO2 Uptake Protein; Low Affinity CO2 Uptake Protein; Uptake
Number of amino acids: Translated: 379; Mature: 378
Protein sequence:
>379_residues MPVIPAEQVHAGPHPTQEQIVQTLLAGQTLLDDTPDHVIQVVDVLKSYGEVLDAYSINLIYQAEEQFLNPFPVLKYLDGD VSPAKLWRHFWHDRINFEYAEYCMKAMLWHGTGGLDEYLDSPEFASNCEAIIACKRRRDPLQGLLHPLFPQFLPELIRTA ATTHALGQFWRVMSDLFIDLAEAEANGEVTSIAGVVDFIRDRLVAAAGNPITYKVRIAGQDFWVLPPEAGLTFLVDVAVP YVEAVFLRGTPFLGTVSFNAQAKQISADQSSFKYGALYADPLPSMGAGIPPSLCMQDMYRHLPERLHNWYQNCTRGEGDV RVKICQSFQKSMFCVTNAAIKGTFPHPLDSTDQAEQEANAAYANAWASRLVVARTNALG
Sequences:
>Translated_379_residues MPVIPAEQVHAGPHPTQEQIVQTLLAGQTLLDDTPDHVIQVVDVLKSYGEVLDAYSINLIYQAEEQFLNPFPVLKYLDGD VSPAKLWRHFWHDRINFEYAEYCMKAMLWHGTGGLDEYLDSPEFASNCEAIIACKRRRDPLQGLLHPLFPQFLPELIRTA ATTHALGQFWRVMSDLFIDLAEAEANGEVTSIAGVVDFIRDRLVAAAGNPITYKVRIAGQDFWVLPPEAGLTFLVDVAVP YVEAVFLRGTPFLGTVSFNAQAKQISADQSSFKYGALYADPLPSMGAGIPPSLCMQDMYRHLPERLHNWYQNCTRGEGDV RVKICQSFQKSMFCVTNAAIKGTFPHPLDSTDQAEQEANAAYANAWASRLVVARTNALG >Mature_378_residues PVIPAEQVHAGPHPTQEQIVQTLLAGQTLLDDTPDHVIQVVDVLKSYGEVLDAYSINLIYQAEEQFLNPFPVLKYLDGDV SPAKLWRHFWHDRINFEYAEYCMKAMLWHGTGGLDEYLDSPEFASNCEAIIACKRRRDPLQGLLHPLFPQFLPELIRTAA TTHALGQFWRVMSDLFIDLAEAEANGEVTSIAGVVDFIRDRLVAAAGNPITYKVRIAGQDFWVLPPEAGLTFLVDVAVPY VEAVFLRGTPFLGTVSFNAQAKQISADQSSFKYGALYADPLPSMGAGIPPSLCMQDMYRHLPERLHNWYQNCTRGEGDVR VKICQSFQKSMFCVTNAAIKGTFPHPLDSTDQAEQEANAAYANAWASRLVVARTNALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42176; Mature: 42045
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIPAEQVHAGPHPTQEQIVQTLLAGQTLLDDTPDHVIQVVDVLKSYGEVLDAYSINLI CCCCCCHHHCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEE YQAEEQFLNPFPVLKYLDGDVSPAKLWRHFWHDRINFEYAEYCMKAMLWHGTGGLDEYLD EECHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCC SPEFASNCEAIIACKRRRDPLQGLLHPLFPQFLPELIRTAATTHALGQFWRVMSDLFIDL CCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAEANGEVTSIAGVVDFIRDRLVAAAGNPITYKVRIAGQDFWVLPPEAGLTFLVDVAVP HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHH YVEAVFLRGTPFLGTVSFNAQAKQISADQSSFKYGALYADPLPSMGAGIPPSLCMQDMYR HHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCEECCEECCCCCCCCCCCCHHHHHHHHHH HLPERLHNWYQNCTRGEGDVRVKICQSFQKSMFCVTNAAIKGTFPHPLDSTDQAEQEANA HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHH AYANAWASRLVVARTNALG HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PVIPAEQVHAGPHPTQEQIVQTLLAGQTLLDDTPDHVIQVVDVLKSYGEVLDAYSINLI CCCCCHHHCCCCCCCHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEE YQAEEQFLNPFPVLKYLDGDVSPAKLWRHFWHDRINFEYAEYCMKAMLWHGTGGLDEYLD EECHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHCC SPEFASNCEAIIACKRRRDPLQGLLHPLFPQFLPELIRTAATTHALGQFWRVMSDLFIDL CCCHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAEANGEVTSIAGVVDFIRDRLVAAAGNPITYKVRIAGQDFWVLPPEAGLTFLVDVAVP HHHCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCCCHHHHHHHHH YVEAVFLRGTPFLGTVSFNAQAKQISADQSSFKYGALYADPLPSMGAGIPPSLCMQDMYR HHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCEECCEECCCCCCCCCCCCHHHHHHHHHH HLPERLHNWYQNCTRGEGDVRVKICQSFQKSMFCVTNAAIKGTFPHPLDSTDQAEQEANA HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHH AYANAWASRLVVARTNALG HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA