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The map label for this gene is rbcL [H]

Identifier: 148241918

GI number: 148241918

Start: 744350

End: 745765

Strand: Direct

Name: rbcL [H]

Synonym: SynRCC307_0819

Alternate gene names: 148241918

Gene position: 744350-745765 (Clockwise)

Preceding gene: 148241917

Following gene: 148241919

Centisome position: 33.46

GC content: 61.09

Gene sequence:

>1416_bases
ATGAGCAAGAAGTACGACGCCGGGGTAAAGGAGTACAGGGACACTTACTGGACTCCTGATTACGTTCCCCTCGATACCGA
CCTGCTGGCCTGCTTCAAGTGCACCGGCCAGGAAGGTGTTCCCAAGGAAGAAGTCGCCGCTGCTGTGGCTGCTGAATCTT
CCACCGGTACCTGGTCCACTGTGTGGTCCGAGCTCCTCACCGACCTCGACTTCTACAAGGGCCGTTGCTATCGCATCGAA
GACGTGCCTGGCGACAAAGAGTCGTTCTACGCCTTCATCGCCTATCCCCTCGACCTGTTCGAGGAAGGCTCCATCACCAA
CGTTCTGACCTCCCTGGTCGGCAACGTTTTTGGTTTCAAGGCTCTGCGCCACCTGCGTCTGGAAGACATCCGCTTCCCGC
TGGCCTTCATCAAGACCTGCTACGGCCCGCCGAACGGCATCGTGGTCGAGCGCGACCGGATGAATAAGTACGGCCGCCCG
CTGCTGGGTTGCACCATCAAGCCGAAGCTCGGCCTGAGCGGTAAGAACTACGGCCGCGTGGTCTACGAATGCCTCCGCGG
TGGTCTCGACTTCACCAAGGACGACGAGAACATCAACTCCCAGCCCTTCCAGCGCTGGCAGAACCGCTTCGAGTTTGTTG
CCGAAGCGATTCGCCTGGCTGAGCAGGAAACCGGCGAGAAGAAAGGTCACTACCTGAACGTGACCGCCAACACGCCGGAA
GAGATGTATGAGCGCGCTGAGTTCGCCAAAGAACTCGGTATGCCGATCGTCATGCACGACTTCATCACTGGTGGCTTCAC
CGCCAACACCGGTTTGTCGAAGTGGTGCCGCAAGAACGGCATGCTCCTGCACATCCACCGCGCCATGCACGCGGTGATCG
ACCGTCATCCCAAGCACGGCATCCACTTCCGTGTGCTGGCCAAGTGCCTGCGCCTCTCCGGTGGTGACCAGCTCCACACC
GGCACCGTGGTGGGCAAGCTCGAGGGTGACCGTCAAACCACCCTGGGTTACATCGACCAGCTGCGTGAGTCCTTCGTTCC
CGAAGACCGCAGCCGTGGCAACTTCTTCGATCAGGACTGGGGCTCCATGCCCGGCGTCTTCGCCGTTGCTTCCGGCGGTA
TCCACGTCTGGCACATGCCCGCCCTGGTCACCATCTTCGGCGACGATTCCGTCCTGCAGTTCGGTGGTGGTACCCACGGT
CACCCCTGGGGTTCCGCTGCTGGTGCAGCTGCCAACCGCGTGGCCCTCGAGGCTTGCGTCAAGGCCCGCAACGCCGGTCG
TCACCTGGAGAAGGAGAGCCGCGACATCCTCATGGAAGCCGCGAAGCACAGCCCCGAGCTGGCCATCGCTCTCGAGACTT
GGAAGGAGATCAAGTTCGAGTTCGACACTGTCGACAAGCTCGACGTCCAGAGCTGA

Upstream 100 bases:

>100_bases
GGCAGCAGCAACTTCCTCGGCTCCAAGGACTGAGATCCAGCCGATCCGCTTCGCGGACGCTGATCCCAACCATTGATCTC
ATCCCATCGGAGTTATCCCT

Downstream 100 bases:

>100_bases
TCAAGCCATCGGCCGGTTAATGCAACCGGCCAAATCCATTTCACACACCCAGGAACAACATGCCTTTCCAGAGCACCGTG
GGTGACTACCAAACAGTCGC

Product: ribulose bisophosphate carboxylase

Products: NA

Alternate protein names: RuBisCO large subunit [H]

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MSKKYDAGVKEYRDTYWTPDYVPLDTDLLACFKCTGQEGVPKEEVAAAVAAESSTGTWSTVWSELLTDLDFYKGRCYRIE
DVPGDKESFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFKALRHLRLEDIRFPLAFIKTCYGPPNGIVVERDRMNKYGRP
LLGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAIRLAEQETGEKKGHYLNVTANTPE
EMYERAEFAKELGMPIVMHDFITGGFTANTGLSKWCRKNGMLLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHT
GTVVGKLEGDRQTTLGYIDQLRESFVPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTHG
HPWGSAAGAAANRVALEACVKARNAGRHLEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQS

Sequences:

>Translated_471_residues
MSKKYDAGVKEYRDTYWTPDYVPLDTDLLACFKCTGQEGVPKEEVAAAVAAESSTGTWSTVWSELLTDLDFYKGRCYRIE
DVPGDKESFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFKALRHLRLEDIRFPLAFIKTCYGPPNGIVVERDRMNKYGRP
LLGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAIRLAEQETGEKKGHYLNVTANTPE
EMYERAEFAKELGMPIVMHDFITGGFTANTGLSKWCRKNGMLLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHT
GTVVGKLEGDRQTTLGYIDQLRESFVPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTHG
HPWGSAAGAAANRVALEACVKARNAGRHLEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQS
>Mature_470_residues
SKKYDAGVKEYRDTYWTPDYVPLDTDLLACFKCTGQEGVPKEEVAAAVAAESSTGTWSTVWSELLTDLDFYKGRCYRIED
VPGDKESFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFKALRHLRLEDIRFPLAFIKTCYGPPNGIVVERDRMNKYGRPL
LGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAIRLAEQETGEKKGHYLNVTANTPEE
MYERAEFAKELGMPIVMHDFITGGFTANTGLSKWCRKNGMLLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTG
TVVGKLEGDRQTTLGYIDQLRESFVPEDRSRGNFFDQDWGSMPGVFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTHGH
PWGSAAGAAANRVALEACVKARNAGRHLEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQS

Specific function: RuBisCO catalyzes two reactions:the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultan

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type I subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020888
- InterPro:   IPR000685
- InterPro:   IPR017443
- InterPro:   IPR017444 [H]

Pfam domain/function: PF00016 RuBisCO_large; PF02788 RuBisCO_large_N [H]

EC number: =4.1.1.39 [H]

Molecular weight: Translated: 52772; Mature: 52641

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00157 RUBISCO_LARGE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKYDAGVKEYRDTYWTPDYVPLDTDLLACFKCTGQEGVPKEEVAAAVAAESSTGTWST
CCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHH
VWSELLTDLDFYKGRCYRIEDVPGDKESFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFK
HHHHHHHHHHHHCCCEEEECCCCCCHHHEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHH
ALRHLRLEDIRFPLAFIKTCYGPPNGIVVERDRMNKYGRPLLGCTIKPKLGLSGKNYGRV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCCCHHHH
VYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAIRLAEQETGEKKGHYLNVTANTPE
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
EMYERAEFAKELGMPIVMHDFITGGFTANTGLSKWCRKNGMLLHIHRAMHAVIDRHPKHG
HHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHCCCCCC
IHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDQLRESFVPEDRSRGNFFDQDW
CHHHHHHHHHHCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GSMPGVFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTHGHPWGSAAGAAANRVALEACV
CCCCCEEEEECCCEEEEECCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
KARNAGRHLEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQS
HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHEEECCCCCCCCCCC
>Mature Secondary Structure 
SKKYDAGVKEYRDTYWTPDYVPLDTDLLACFKCTGQEGVPKEEVAAAVAAESSTGTWST
CCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHH
VWSELLTDLDFYKGRCYRIEDVPGDKESFYAFIAYPLDLFEEGSITNVLTSLVGNVFGFK
HHHHHHHHHHHHCCCEEEECCCCCCHHHEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHH
ALRHLRLEDIRFPLAFIKTCYGPPNGIVVERDRMNKYGRPLLGCTIKPKLGLSGKNYGRV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCCCEEEEEECCCCCCCCCCHHHH
VYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAIRLAEQETGEKKGHYLNVTANTPE
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH
EMYERAEFAKELGMPIVMHDFITGGFTANTGLSKWCRKNGMLLHIHRAMHAVIDRHPKHG
HHHHHHHHHHHHCCCEEEHHHHCCCCCCCCCHHHHHHHCCCEEEHHHHHHHHHHCCCCCC
IHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDQLRESFVPEDRSRGNFFDQDW
CHHHHHHHHHHCCCCCEEECCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GSMPGVFAVASGGIHVWHMPALVTIFGDDSVLQFGGGTHGHPWGSAAGAAANRVALEACV
CCCCCEEEEECCCEEEEECCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHH
KARNAGRHLEKESRDILMEAAKHSPELAIALETWKEIKFEFDTVDKLDVQS
HHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA