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The map label for this gene is csoS1/ccmK1 [H]

Identifier: 148241917

GI number: 148241917

Start: 743968

End: 744282

Strand: Direct

Name: csoS1/ccmK1 [H]

Synonym: SynRCC307_0818

Alternate gene names: 148241917

Gene position: 743968-744282 (Clockwise)

Preceding gene: 148241916

Following gene: 148241918

Centisome position: 33.44

GC content: 64.13

Gene sequence:

>315_bases
ATGGCAACTGAAACCATGGGCATTGCCCTCGGCATGATTGAAACCCGCGGCTTGGTCCCCGCGATCGAAGCAGCTGACGC
CATGACCAAGGCCGCCGAAGTGCGCCTGATCGGTCGTGAATTCGTCGGCGGCGGCTACGTCACCGTTCTGGTGCGCGGCG
AAACCGGTGCTGTGAACGCAGCTGTTCGTGCTGGTGCTGATGCTTGCGAGCGCGTCGGTGACGGCCTCGTGGCAGCCCAC
ATCATTGCCCGCCCCCACCGCGAAGTTGAGCCTGCTCTCGGCGGCAGCAGCAACTTCCTCGGCTCCAAGGACTGA

Upstream 100 bases:

>100_bases
CTTTAGACACTGATTGGTCAGGGGTCTCAAACGTCTTGACGGATGACTGGGCCACAGAGCAGTGTTAGCCGCGAACTTCC
GCCTCTTTCTGGAGCTGGCA

Downstream 100 bases:

>100_bases
GATCCAGCCGATCCGCTTCGCGGACGCTGATCCCAACCATTGATCTCATCCCATCGGAGTTATCCCTATGAGCAAGAAGT
ACGACGCCGGGGTAAAGGAG

Product: carboxysome shell peptide

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGGSSNFLGSKD

Sequences:

>Translated_104_residues
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGGSSNFLGSKD
>Mature_103_residues
ATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARPHREVEPALGGSSNFLGSKD

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=96, Percent_Identity=53.125, Blast_Score=80, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10590; Mature: 10459

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNA
CCCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHEEECHHHCCCCEEEEEEECCCCCCHH
AVRAGADACERVGDGLVAAHIIARPHREVEPALGGSSNFLGSKD
HHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNA
CCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHEEECHHHCCCCEEEEEEECCCCCCHH
AVRAGADACERVGDGLVAAHIIARPHREVEPALGGSSNFLGSKD
HHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]