Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148241905

Identifier: 148241905

GI number: 148241905

Start: 736812

End: 737027

Strand: Direct

Name: 148241905

Synonym: SynRCC307_0806

Alternate gene names: NA

Gene position: 736812-737027 (Clockwise)

Preceding gene: 148241904

Following gene: 148241909

Centisome position: 33.12

GC content: 54.17

Gene sequence:

>216_bases
TTGAGTGATCCAGTGACTCGACTTCCTCGCATTCGCAATCCATTGCTGCGGCGTGAACTGCCCTGGTTGGTAGCTGATGT
GGTGTTGTTGCTGATTTTGTTCAATGCCAATGCCCCCGAGCTCTGGTTTTGGCTCGTGGTGCTGTTGGTGATCTTGGCTT
ACCGCTATGAGCGCTGGTGGTCATCGCGGCCCCAAAACGACGACTCACGTGATTGA

Upstream 100 bases:

>100_bases
AGTTATGTGATTCCTGGCCTGCGCTCCCTGACCGGTGGATTCCGCACCTTGCGCATCGATCGCCTCTGGAACCGCCCCTT
CTTGGTTCAACCCGACACGA

Downstream 100 bases:

>100_bases
GCTTGTGCTGGCTTAGCTGCTCTGCCAATCGGCCCATTGCCGTTCTGTTTGCTCAATGGTGCGCTGGATTTGGCGGCAGC
GACTAATGCGACTGGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 70

Protein sequence:

>71_residues
MSDPVTRLPRIRNPLLRRELPWLVADVVLLLILFNANAPELWFWLVVLLVILAYRYERWWSSRPQNDDSRD

Sequences:

>Translated_71_residues
MSDPVTRLPRIRNPLLRRELPWLVADVVLLLILFNANAPELWFWLVVLLVILAYRYERWWSSRPQNDDSRD
>Mature_70_residues
SDPVTRLPRIRNPLLRRELPWLVADVVLLLILFNANAPELWFWLVVLLVILAYRYERWWSSRPQNDDSRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8588; Mature: 8457

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPVTRLPRIRNPLLRRELPWLVADVVLLLILFNANAPELWFWLVVLLVILAYRYERWW
CCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SSRPQNDDSRD
CCCCCCCCCCC
>Mature Secondary Structure 
SDPVTRLPRIRNPLLRRELPWLVADVVLLLILFNANAPELWFWLVVLLVILAYRYERWW
CCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SSRPQNDDSRD
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA