Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241904

Identifier: 148241904

GI number: 148241904

Start: 735476

End: 736819

Strand: Direct

Name: 148241904

Synonym: SynRCC307_0805

Alternate gene names: NA

Gene position: 735476-736819 (Clockwise)

Preceding gene: 148241902

Following gene: 148241905

Centisome position: 33.06

GC content: 59.82

Gene sequence:

>1344_bases
ATGGCGAAGCGTTTCTTCTCCCAACTGCTCGATCGCTGTGAGGCCAAAGCCGAACAGCTCAAAACCCGCTGGGCCGGCCT
GAGTGACCACGGCCAGGTTGGCGTTTGCCTCACCGGCGTCACCGGGGTCTTGGTGCTATGGGCCCTGTTTTGGCCGGTGC
CAACCGAGGTCAAAGGCCAAGGCGTGTTGATCTTTCCCAGCAAGGCGGGATTGCTCAATGCCCGGGCGCAAGGCCAAGTT
CTGGCCGTGAATGTGGAGGTGGGCGATCGGGTCAAGCAAGGCCAAGAGCTGATGTCGCTCTATTTGCCGGTTTTGGAACG
GGAATTGGCGCAGCAGCGGGGCAACTTGCTGCAGCTCGAAGCCATCAACCGCGAGCTCAATGAGCGTGATGCCCGTCGCT
TGGAGACTGAAAAGGCCGCCGTGGATGTGGCCCTCGCCAAATTCGATGACGATCTCGACCGCTACAGCCGCCTGCAAGCG
ACCTATGGCAACAAGCTGAACAACCTCGAATGGCTCAGTTCACGCCAGGTGGTAGCCCCGCTGTCCCGTGAGGTGGTTTC
AGCTGAGCAGGGTCTGACCAATACCAGCGTCAGCCTTGATGACGTCACGATTCAGCGCAAGCGGGTGTTGACGGCTTATC
AGCAGGTGAAGCTCGACATTGAAACCGAAGCGCTCGAGCGGCAATTCGCCATTGGTGATCTCAAGCGCAAGATCAGCGTC
ACCGAAGCCCAGATCGCTTACGACGGCAAGGTCATGGCTGGACGTGATGGCGTCATGATTGATCTTCAGGTGATCCCAGG
TCAGACGGTCAAAGTCAGCGACCGCTTGGGAACCATCTTGGGATCGTCTGAGGCCGGAGAAAGCAAGGCTCCCCAGCTCA
ATGCCGTGGCCTATTTCAAGCCTGCTGATGCGCGCCGTCTACCGCTGGGCTTACCCGTGGAGGTGGTTCCTGATTGGCAG
CAGCGCGGACGCTTTGGCGGGATCGTTGGCAAGGTCACGAGCGTTCTCACCCTCCCCTCCACCGAAGACGATGTGTCCAC
CACAACGGGTAACCCGCAGCTGGCCAAGGAGCTCACCAAAGATGGGCCGGTGATGCGCGCTGAAATTGGGTTGGTGCGGA
GCAAAGGCAGCATGGATGGCTACCGCTGGACGCTCTCATTGGGCAGTGGTGTGTTCCCAATCCGCGAGGGCTTAACCGCC
ACCACCCATGCCTATGTGGAGTGGCGCTCCCCCTTGAGTTATGTGATTCCTGGCCTGCGCTCCCTGACCGGTGGATTCCG
CACCTTGCGCATCGATCGCCTCTGGAACCGCCCCTTCTTGGTTCAACCCGACACGATTGAGTGA

Upstream 100 bases:

>100_bases
ATCAAGCCAAGAGGGCGCGCGATCAACAACCTGGACAAAGAGTTCGGCGGCAGTCTGGCTTGATCTGGTTGTCCTTGCCC
GGATCTGAGCGTTAAACGCC

Downstream 100 bases:

>100_bases
TCCAGTGACTCGACTTCCTCGCATTCGCAATCCATTGCTGCGGCGTGAACTGCCCTGGTTGGTAGCTGATGTGGTGTTGT
TGCTGATTTTGTTCAATGCC

Product: membrane-fusion protein

Products: NA

Alternate protein names: Membrane-Fusion Protein; Secretion Protein HlyD Family Protein; Type I Secretion Adaptor Protein; Chromosome Segregation ATPase-Like Protein; Multidrug Resistance Efflux Pump

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MAKRFFSQLLDRCEAKAEQLKTRWAGLSDHGQVGVCLTGVTGVLVLWALFWPVPTEVKGQGVLIFPSKAGLLNARAQGQV
LAVNVEVGDRVKQGQELMSLYLPVLERELAQQRGNLLQLEAINRELNERDARRLETEKAAVDVALAKFDDDLDRYSRLQA
TYGNKLNNLEWLSSRQVVAPLSREVVSAEQGLTNTSVSLDDVTIQRKRVLTAYQQVKLDIETEALERQFAIGDLKRKISV
TEAQIAYDGKVMAGRDGVMIDLQVIPGQTVKVSDRLGTILGSSEAGESKAPQLNAVAYFKPADARRLPLGLPVEVVPDWQ
QRGRFGGIVGKVTSVLTLPSTEDDVSTTTGNPQLAKELTKDGPVMRAEIGLVRSKGSMDGYRWTLSLGSGVFPIREGLTA
TTHAYVEWRSPLSYVIPGLRSLTGGFRTLRIDRLWNRPFLVQPDTIE

Sequences:

>Translated_447_residues
MAKRFFSQLLDRCEAKAEQLKTRWAGLSDHGQVGVCLTGVTGVLVLWALFWPVPTEVKGQGVLIFPSKAGLLNARAQGQV
LAVNVEVGDRVKQGQELMSLYLPVLERELAQQRGNLLQLEAINRELNERDARRLETEKAAVDVALAKFDDDLDRYSRLQA
TYGNKLNNLEWLSSRQVVAPLSREVVSAEQGLTNTSVSLDDVTIQRKRVLTAYQQVKLDIETEALERQFAIGDLKRKISV
TEAQIAYDGKVMAGRDGVMIDLQVIPGQTVKVSDRLGTILGSSEAGESKAPQLNAVAYFKPADARRLPLGLPVEVVPDWQ
QRGRFGGIVGKVTSVLTLPSTEDDVSTTTGNPQLAKELTKDGPVMRAEIGLVRSKGSMDGYRWTLSLGSGVFPIREGLTA
TTHAYVEWRSPLSYVIPGLRSLTGGFRTLRIDRLWNRPFLVQPDTIE
>Mature_446_residues
AKRFFSQLLDRCEAKAEQLKTRWAGLSDHGQVGVCLTGVTGVLVLWALFWPVPTEVKGQGVLIFPSKAGLLNARAQGQVL
AVNVEVGDRVKQGQELMSLYLPVLERELAQQRGNLLQLEAINRELNERDARRLETEKAAVDVALAKFDDDLDRYSRLQAT
YGNKLNNLEWLSSRQVVAPLSREVVSAEQGLTNTSVSLDDVTIQRKRVLTAYQQVKLDIETEALERQFAIGDLKRKISVT
EAQIAYDGKVMAGRDGVMIDLQVIPGQTVKVSDRLGTILGSSEAGESKAPQLNAVAYFKPADARRLPLGLPVEVVPDWQQ
RGRFGGIVGKVTSVLTLPSTEDDVSTTTGNPQLAKELTKDGPVMRAEIGLVRSKGSMDGYRWTLSLGSGVFPIREGLTAT
THAYVEWRSPLSYVIPGLRSLTGGFRTLRIDRLWNRPFLVQPDTIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49320; Mature: 49189

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRFFSQLLDRCEAKAEQLKTRWAGLSDHGQVGVCLTGVTGVLVLWALFWPVPTEVKGQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCC
GVLIFPSKAGLLNARAQGQVLAVNVEVGDRVKQGQELMSLYLPVLERELAQQRGNLLQLE
EEEEECCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEH
AINRELNERDARRLETEKAAVDVALAKFDDDLDRYSRLQATYGNKLNNLEWLSSRQVVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHH
LSREVVSAEQGLTNTSVSLDDVTIQRKRVLTAYQQVKLDIETEALERQFAIGDLKRKISV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH
TEAQIAYDGKVMAGRDGVMIDLQVIPGQTVKVSDRLGTILGSSEAGESKAPQLNAVAYFK
EEEEEEECCEEEECCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEC
PADARRLPLGLPVEVVPDWQQRGRFGGIVGKVTSVLTLPSTEDDVSTTTGNPQLAKELTK
CCCCCCCCCCCCCEECCCHHHCCCCCCHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHC
DGPVMRAEIGLVRSKGSMDGYRWTLSLGSGVFPIREGLTATTHAYVEWRSPLSYVIPGLR
CCCEEEEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCCCCEEEEEEECCCHHHHCCCHH
SLTGGFRTLRIDRLWNRPFLVQPDTIE
HHCCCCEEEEEEHHCCCCEECCCCCCC
>Mature Secondary Structure 
AKRFFSQLLDRCEAKAEQLKTRWAGLSDHGQVGVCLTGVTGVLVLWALFWPVPTEVKGQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCC
GVLIFPSKAGLLNARAQGQVLAVNVEVGDRVKQGQELMSLYLPVLERELAQQRGNLLQLE
EEEEECCCCCEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEH
AINRELNERDARRLETEKAAVDVALAKFDDDLDRYSRLQATYGNKLNNLEWLSSRQVVAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHH
LSREVVSAEQGLTNTSVSLDDVTIQRKRVLTAYQQVKLDIETEALERQFAIGDLKRKISV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHH
TEAQIAYDGKVMAGRDGVMIDLQVIPGQTVKVSDRLGTILGSSEAGESKAPQLNAVAYFK
EEEEEEECCEEEECCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEC
PADARRLPLGLPVEVVPDWQQRGRFGGIVGKVTSVLTLPSTEDDVSTTTGNPQLAKELTK
CCCCCCCCCCCCCEECCCHHHCCCCCCHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHC
DGPVMRAEIGLVRSKGSMDGYRWTLSLGSGVFPIREGLTATTHAYVEWRSPLSYVIPGLR
CCCEEEEEEEEEECCCCCCCEEEEEECCCCCCHHHCCCCCCEEEEEEECCCHHHHCCCHH
SLTGGFRTLRIDRLWNRPFLVQPDTIE
HHCCCCEEEEEEHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA