| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
Click here to switch to the map view.
The map label for this gene is metA [H]
Identifier: 148241895
GI number: 148241895
Start: 727368
End: 728273
Strand: Direct
Name: metA [H]
Synonym: SynRCC307_0796
Alternate gene names: 148241895
Gene position: 727368-728273 (Clockwise)
Preceding gene: 148241894
Following gene: 148241896
Centisome position: 32.69
GC content: 57.73
Gene sequence:
>906_bases GTGGCGCTCATTCTGCCGAAGAACTATCACAAAGTTGCGGCGATTGAGCGCAATGGGATCTCCTGGATTGAGCCTGAATT GGCGGAGCGGCAAGACATCAGACCGCTGCGCATCGGCATCATCAACATCATGCCTTTGGGCATGCAATATGAGTTCAATT TGTTGCATCCCCTTGGCCTTTCGCCGCTGCAGATTGAACCCGTGTGGATTCGTCTTCAATCCCACGACTACAAGACCTGG GATCACGACCATCTCGATCAGCAATATCGCTCTTGGGAGCAAGCCAATGCATCAGCGTCCCTCGATGGTTTGATCATCAC TGGTGCCCCTGTTGAGCATTTGGCCTACGAGCAGGTCACCTATTGGCAGGAAATGGTCGAGTTGGTTGGCATTGCCCGCA CCCAGTGCGCCAGCACGCTGGGTCTGTGTTGGGCTGGATTTGCCTTGGCCTACCTGGCCGGGGTCGATAAGACGGCGTTT GCGCAGAAGTTGTTTGGGGTGTTCCCCATGCGCAGCCTCAAGCCAGGGCATGCCCTGATGGGCACCCAAGACGACAGCTT TTTCTGTCCGCAAAGCCGGCACGCTGGTTTGGATGATGCCGCCATGGAGCAGGCCCAGCGGCAAGGGCGCTTGCGTTTAC TCGCCCACGGTGAGCAGGTGGGCTACAGCATTTTTGAAACCCCCGATCAACGTCAACTGATGCATTTGGGTCATCCGGAG TACAGCTCCGGGCGCTTGCTCGCGGAGATGGAACGGGACCGTGCTCGCGGTGATGTGCCGCCGCCGCAAAACTTTGATGC CGAACTGCCGCAAACGCTGTGGCGCTCCCACCGCAATCTGTTTTTTCAGCAGTGGCTCTGGTTCTGCTATCAGCGCATCA GCCTGGCCTCCCCCGCAGGGGCTTAA
Upstream 100 bases:
>100_bases CATGGTGCGCGTTTCGGTGGGCATTGAGCACATTGATGACATCGTTGCCGACTTCAGCCAGGCCCTCGCGGGCCTGAGTT GACGACGAGGGCAAGAGACC
Downstream 100 bases:
>100_bases GGCTTGACTGGCTTGATCCTCTACAGCTTTCGGCGTTGCCCCTATGCGATTCGGGCCCGTTTGGCCCTGCGTCAAGCCGG CATTACCCCCGAACTGCGGG
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS [H]
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MALILPKNYHKVAAIERNGISWIEPELAERQDIRPLRIGIINIMPLGMQYEFNLLHPLGLSPLQIEPVWIRLQSHDYKTW DHDHLDQQYRSWEQANASASLDGLIITGAPVEHLAYEQVTYWQEMVELVGIARTQCASTLGLCWAGFALAYLAGVDKTAF AQKLFGVFPMRSLKPGHALMGTQDDSFFCPQSRHAGLDDAAMEQAQRQGRLRLLAHGEQVGYSIFETPDQRQLMHLGHPE YSSGRLLAEMERDRARGDVPPPQNFDAELPQTLWRSHRNLFFQQWLWFCYQRISLASPAGA
Sequences:
>Translated_301_residues MALILPKNYHKVAAIERNGISWIEPELAERQDIRPLRIGIINIMPLGMQYEFNLLHPLGLSPLQIEPVWIRLQSHDYKTW DHDHLDQQYRSWEQANASASLDGLIITGAPVEHLAYEQVTYWQEMVELVGIARTQCASTLGLCWAGFALAYLAGVDKTAF AQKLFGVFPMRSLKPGHALMGTQDDSFFCPQSRHAGLDDAAMEQAQRQGRLRLLAHGEQVGYSIFETPDQRQLMHLGHPE YSSGRLLAEMERDRARGDVPPPQNFDAELPQTLWRSHRNLFFQQWLWFCYQRISLASPAGA >Mature_300_residues ALILPKNYHKVAAIERNGISWIEPELAERQDIRPLRIGIINIMPLGMQYEFNLLHPLGLSPLQIEPVWIRLQSHDYKTWD HDHLDQQYRSWEQANASASLDGLIITGAPVEHLAYEQVTYWQEMVELVGIARTQCASTLGLCWAGFALAYLAGVDKTAFA QKLFGVFPMRSLKPGHALMGTQDDSFFCPQSRHAGLDDAAMEQAQRQGRLRLLAHGEQVGYSIFETPDQRQLMHLGHPEY SSGRLLAEMERDRARGDVPPPQNFDAELPQTLWRSHRNLFFQQWLWFCYQRISLASPAGA
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family [H]
Homologues:
Organism=Escherichia coli, GI1790443, Length=299, Percent_Identity=32.7759197324415, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005697 - ProDom: PD037892 [H]
Pfam domain/function: PF04204 HTS [H]
EC number: =2.3.1.46 [H]
Molecular weight: Translated: 34335; Mature: 34203
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALILPKNYHKVAAIERNGISWIEPELAERQDIRPLRIGIINIMPLGMQYEFNLLHPLGL CEEECCCCCCEEEEEECCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCCCC SPLQIEPVWIRLQSHDYKTWDHDHLDQQYRSWEQANASASLDGLIITGAPVEHLAYEQVT CCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHH YWQEMVELVGIARTQCASTLGLCWAGFALAYLAGVDKTAFAQKLFGVFPMRSLKPGHALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEE GTQDDSFFCPQSRHAGLDDAAMEQAQRQGRLRLLAHGEQVGYSIFETPDQRQLMHLGHPE CCCCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHCCHHHCCCCHHHHHHCCCCC YSSGRLLAEMERDRARGDVPPPQNFDAELPQTLWRSHRNLFFQQWLWFCYQRISLASPAG CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC A C >Mature Secondary Structure ALILPKNYHKVAAIERNGISWIEPELAERQDIRPLRIGIINIMPLGMQYEFNLLHPLGL EEECCCCCCEEEEEECCCCCCCCCHHHHHCCCCCEEEEEEEEEECCCEEEEEEECCCCC SPLQIEPVWIRLQSHDYKTWDHDHLDQQYRSWEQANASASLDGLIITGAPVEHLAYEQVT CCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHH YWQEMVELVGIARTQCASTLGLCWAGFALAYLAGVDKTAFAQKLFGVFPMRSLKPGHALM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEE GTQDDSFFCPQSRHAGLDDAAMEQAQRQGRLRLLAHGEQVGYSIFETPDQRQLMHLGHPE CCCCCCEECCCCCCCCCCHHHHHHHHHCCCEEEEECCHHHCCHHHCCCCHHHHHHCCCCC YSSGRLLAEMERDRARGDVPPPQNFDAELPQTLWRSHRNLFFQQWLWFCYQRISLASPAG CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]