Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241792

Identifier: 148241792

GI number: 148241792

Start: 626365

End: 626922

Strand: Direct

Name: 148241792

Synonym: SynRCC307_0693

Alternate gene names: NA

Gene position: 626365-626922 (Clockwise)

Preceding gene: 148241791

Following gene: 148241793

Centisome position: 28.15

GC content: 48.03

Gene sequence:

>558_bases
ATGGCAGCACGCAAGAAGAAACTCAAAAAACCTGAGGTGCTTGATCTGATACTTGCGCTTCAGGCATCAGGCAATATCAC
CGTTGAAATGCTTCTGAACTTTGCAGAGCAAATCAATGGCGGCCCATTCACAGAGCCAAGTGCAACGAAGCCCAAGGCGA
TAACCATGGCAAAAATGAGGAAGGCAGTTCTTGCCAAGTTTGGATGTAAGACAGTTACAGAGCTCAGAAAGAATCGAACT
TTTGAAATGGCTTTCACTGGAGAGAAGGTCAGCCTTAAGTCAACGGAAGATTGGCGGGTTCAATATCGCAAGTGGGTTGC
TGTTCCAAATGACGAGCGTAATCAAAGCGGCCAGACCTGCATTAATGGCGTTGACGTACTAGAGAACTTCAGGCCTTGGC
ACATCTTTGGTCTCGATTCTGCAACGGCAACTGAAAGCGATGTCAAAGGGTCATTCAGAGACTTGGCCAAGAAGCATCAT
CCAGATGTCGGTGGAGATGCACGGGTCTTTGAGCGCCTGCAGAAGATGCGCGATTCCCTTTTGGCCTTGATGAACTAA

Upstream 100 bases:

>100_bases
ATCATCAGATGGAAAAACTTACATGCTGCACAGTGGTATGTGGATTGAAGAGCAAATTTTAAATCGCTGAATTCACGCTT
AATTTTCCTCAAGGAGTCAT

Downstream 100 bases:

>100_bases
CAGGAGTTATTAGCGATGAGAGACTTCCTTACTGACCGCGAAACAGCCAAAATCCTTGGCAAGCGAATTGACACCCTCTA
CAAAACCGTCGATTTCTTTG

Product: DnaJ domain-containing protein

Products: NA

Alternate protein names: DNAJ Domain Protein; Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MAARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMRKAVLAKFGCKTVTELRKNRT
FEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTCINGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHH
PDVGGDARVFERLQKMRDSLLALMN

Sequences:

>Translated_185_residues
MAARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMRKAVLAKFGCKTVTELRKNRT
FEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTCINGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHH
PDVGGDARVFERLQKMRDSLLALMN
>Mature_184_residues
AARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMRKAVLAKFGCKTVTELRKNRTF
EMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTCINGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHHP
DVGGDARVFERLQKMRDSLLALMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20810; Mature: 20679

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMR
CCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
KAVLAKFGCKTVTELRKNRTFEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTC
HHHHHHHCHHHHHHHHHCCCEEEEECCCEEEECCCHHHHHHHHHEECCCCCCCCCCCHHH
INGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHHPDVGGDARVFERLQKMRDSL
HHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LALMN
HHHCC
>Mature Secondary Structure 
AARKKKLKKPEVLDLILALQASGNITVEMLLNFAEQINGGPFTEPSATKPKAITMAKMR
CCCHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
KAVLAKFGCKTVTELRKNRTFEMAFTGEKVSLKSTEDWRVQYRKWVAVPNDERNQSGQTC
HHHHHHHCHHHHHHHHHCCCEEEEECCCEEEECCCHHHHHHHHHEECCCCCCCCCCCHHH
INGVDVLENFRPWHIFGLDSATATESDVKGSFRDLAKKHHPDVGGDARVFERLQKMRDSL
HHHHHHHHCCCCEEEEECCCCCCCHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LALMN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA