| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is ppX [H]
Identifier: 148241786
GI number: 148241786
Start: 621237
End: 622922
Strand: Direct
Name: ppX [H]
Synonym: SynRCC307_0687
Alternate gene names: 148241786
Gene position: 621237-622922 (Clockwise)
Preceding gene: 148241783
Following gene: 148241788
Centisome position: 27.92
GC content: 61.21
Gene sequence:
>1686_bases GTGTGCCACGGCCATCTTGACCCCCTGGTGAGCGCAGCGCGTCGACCCACAGCAGAGGCTGAGCTGGAGAAGCTGGCGTC GGTGATGCCGGTGGGAGAGGGGTTGCGCCGTGTGGCAGCGATTGATCTCGGCACCAACTCCACCCACCTGTTGATTGCAT CGGTGGACCCGCAATTGCGCACTTTTCAGGTGTTGCTGGCGGAAAAATCCACTACCCGCTTGGGGGAACGCGATCCCGAT ACCGGTGATCTGTCGCCAGAAGCGATGGAGCGGGCACGCTTGGCCCTGCGCCATTGCCGTGAGCTGGCCAGCAGCCACGA CGTTGAGGAGATTGTTTGCGTGGCCACCAGCGCCATGCGGGAAGCTCCCAATGGGCTGGCGTTTTTGGAGGAGGTTGAGC GGGACTTTGGCCTGAAAACCGAGGTCATCAGTGGGCCCGAAGAGGCGCGCTTGATCTACCTCGGTGTGCTCTCAGGCATG GATTTTGCCGAGCAGCCCCACTACATCCTCGATATCGGCGGCGGCTCCACCGAGCTGATCTTGGCTGATGCAGGTGATGC CCGTGCCCTCACCAGTTCCCGGGTCGGGGCCGTGCGGTTGCAACGCGATTTCATTCGTCAAGAGCCGCTTGATCGCAAGC GGGTGCAGTTCTTAAGGGCTTTCATCCAGGGCTCCATGGAGCCGGCTGTGGAGAAGGTGCGCCGCCGGCTTGAGCCCGAT GAAACGCCGGTGTTGGTGGCCACCAGTGGCACGGCCATGGCGGCTGCGGCGCTGTTGGCGGTGGATCGCCCTGAACTCAA TGGGCGTCTGCATGGTGCTGAGTTCAGCCGCGCTGAGTTGGACGCGTTGGTGCAACGGGTGCTTTCGCTCACCCCGGAGG AGCGCCGCGCCTTGCCGGGCATCAATGCGCGCCGGGCCGAAATCATCGTTCCAGGCCTGCTGGTGCTGCAGCAGGCCATG GAGATGCTTGGGGCTAGCTACTTCGTTATCAGTGATCGCGCCCTGCGGGAGGGCTTGATCATTGATTGGATGCTGCGGCA CGACTTGATCGTTGATCGCTTCGTCTACCAAGGCGAGATCAGGCGCCGCACCGTGATGCATCACGCCAGCAAATACGGGG TATCGATTACCCGTGCGGAGCGGATTGCTGCCTTTGCCCTGGACCTGTGGGATCAGACCCGCGGCTCGTTGCACCAAGCC CCTGAATCGTCGCGCCAACTGCTGTGGGCTGCTGCGATGGTGCACCGCTGCGGGCTACGCATTAACACCAGTGCTTATCA CAAGCATTCCTGGTATCTGGTTCAGAACGGAGAGCTGCTGGGCTACAGCCACAGCGAGCAGCGGGTGATCGCCTCATTGG CGCGGTATCACCGCAAAAGCTTGCCCAAAAAGAGGCATGAGAGCTGGAATCTGCTCTCTCAAGAGGAGAAGACCCTGGTA GAGCGCCTCTCGTTGTTGCTGCGTTTGGCCGTTGCCATGGATCGGCGACCCGGTGGAGCCGTCAAGAAAGTGGTGGCGAG TTGCACTAGCAAACAACTCAAGCTTCAGCTTGAACCCATCGACGTTGGCGATGACTTGTCTCTGGAGCTATGGAGTTTGC AAACCTGTGCGCCCATGATTCAGAGCGCTGCTGGTCTTAGCCTGCGTTCGGAGCTGTTGCGCTCGCGGCAGCCACTGGCG GTTTAA
Upstream 100 bases:
>100_bases GCCAGTGGGTTTGTGCCAACGCAGCAGCTCCAGCCAGGCCGGCCAGCGATAGGAAAGGCTGGGAGATCGGGCCACCAAGG AGCCGGAATTCGATGCGAGA
Downstream 100 bases:
>100_bases AGGTCACCCACTGGATCGTTTCAATCGAGCCCAGGGCTTTGGCTGGCTGATCGCCGATGTGGGCCATCACCAGATCAGGG CGTCCCGCTAAGACCTGCAC
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues MCHGHLDPLVSAARRPTAEAELEKLASVMPVGEGLRRVAAIDLGTNSTHLLIASVDPQLRTFQVLLAEKSTTRLGERDPD TGDLSPEAMERARLALRHCRELASSHDVEEIVCVATSAMREAPNGLAFLEEVERDFGLKTEVISGPEEARLIYLGVLSGM DFAEQPHYILDIGGGSTELILADAGDARALTSSRVGAVRLQRDFIRQEPLDRKRVQFLRAFIQGSMEPAVEKVRRRLEPD ETPVLVATSGTAMAAAALLAVDRPELNGRLHGAEFSRAELDALVQRVLSLTPEERRALPGINARRAEIIVPGLLVLQQAM EMLGASYFVISDRALREGLIIDWMLRHDLIVDRFVYQGEIRRRTVMHHASKYGVSITRAERIAAFALDLWDQTRGSLHQA PESSRQLLWAAAMVHRCGLRINTSAYHKHSWYLVQNGELLGYSHSEQRVIASLARYHRKSLPKKRHESWNLLSQEEKTLV ERLSLLLRLAVAMDRRPGGAVKKVVASCTSKQLKLQLEPIDVGDDLSLELWSLQTCAPMIQSAAGLSLRSELLRSRQPLA V
Sequences:
>Translated_561_residues MCHGHLDPLVSAARRPTAEAELEKLASVMPVGEGLRRVAAIDLGTNSTHLLIASVDPQLRTFQVLLAEKSTTRLGERDPD TGDLSPEAMERARLALRHCRELASSHDVEEIVCVATSAMREAPNGLAFLEEVERDFGLKTEVISGPEEARLIYLGVLSGM DFAEQPHYILDIGGGSTELILADAGDARALTSSRVGAVRLQRDFIRQEPLDRKRVQFLRAFIQGSMEPAVEKVRRRLEPD ETPVLVATSGTAMAAAALLAVDRPELNGRLHGAEFSRAELDALVQRVLSLTPEERRALPGINARRAEIIVPGLLVLQQAM EMLGASYFVISDRALREGLIIDWMLRHDLIVDRFVYQGEIRRRTVMHHASKYGVSITRAERIAAFALDLWDQTRGSLHQA PESSRQLLWAAAMVHRCGLRINTSAYHKHSWYLVQNGELLGYSHSEQRVIASLARYHRKSLPKKRHESWNLLSQEEKTLV ERLSLLLRLAVAMDRRPGGAVKKVVASCTSKQLKLQLEPIDVGDDLSLELWSLQTCAPMIQSAAGLSLRSELLRSRQPLA V >Mature_561_residues MCHGHLDPLVSAARRPTAEAELEKLASVMPVGEGLRRVAAIDLGTNSTHLLIASVDPQLRTFQVLLAEKSTTRLGERDPD TGDLSPEAMERARLALRHCRELASSHDVEEIVCVATSAMREAPNGLAFLEEVERDFGLKTEVISGPEEARLIYLGVLSGM DFAEQPHYILDIGGGSTELILADAGDARALTSSRVGAVRLQRDFIRQEPLDRKRVQFLRAFIQGSMEPAVEKVRRRLEPD ETPVLVATSGTAMAAAALLAVDRPELNGRLHGAEFSRAELDALVQRVLSLTPEERRALPGINARRAEIIVPGLLVLQQAM EMLGASYFVISDRALREGLIIDWMLRHDLIVDRFVYQGEIRRRTVMHHASKYGVSITRAERIAAFALDLWDQTRGSLHQA PESSRQLLWAAAMVHRCGLRINTSAYHKHSWYLVQNGELLGYSHSEQRVIASLARYHRKSLPKKRHESWNLLSQEEKTLV ERLSLLLRLAVAMDRRPGGAVKKVVASCTSKQLKLQLEPIDVGDDLSLELWSLQTCAPMIQSAAGLSLRSELLRSRQPLA V
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=469, Percent_Identity=29.8507462686567, Blast_Score=165, Evalue=7e-42, Organism=Escherichia coli, GI48994966, Length=458, Percent_Identity=27.7292576419214, Blast_Score=138, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 62355; Mature: 62355
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCHGHLDPLVSAARRPTAEAELEKLASVMPVGEGLRRVAAIDLGTNSTHLLIASVDPQLR CCCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEEEEECCCCHH TFQVLLAEKSTTRLGERDPDTGDLSPEAMERARLALRHCRELASSHDVEEIVCVATSAMR HHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EAPNGLAFLEEVERDFGLKTEVISGPEEARLIYLGVLSGMDFAEQPHYILDIGGGSTELI HCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEE LADAGDARALTSSRVGAVRLQRDFIRQEPLDRKRVQFLRAFIQGSMEPAVEKVRRRLEPD EECCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC ETPVLVATSGTAMAAAALLAVDRPELNGRLHGAEFSRAELDALVQRVLSLTPEERRALPG CCCEEEEECCHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHCCCC INARRAEIIVPGLLVLQQAMEMLGASYFVISDRALREGLIIDWMLRHDLIVDRFVYQGEI CCCCCHHEEHHHHHHHHHHHHHHCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHH RRRTVMHHASKYGVSITRAERIAAFALDLWDQTRGSLHQAPESSRQLLWAAAMVHRCGLR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCE INTSAYHKHSWYLVQNGELLGYSHSEQRVIASLARYHRKSLPKKRHESWNLLSQEEKTLV ECCCEEECEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH ERLSLLLRLAVAMDRRPGGAVKKVVASCTSKQLKLQLEPIDVGDDLSLELWSLQTCAPMI HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHH QSAAGLSLRSELLRSRQPLAV HHHCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MCHGHLDPLVSAARRPTAEAELEKLASVMPVGEGLRRVAAIDLGTNSTHLLIASVDPQLR CCCCCCCHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHEEEEECCCCCEEEEEECCCCHH TFQVLLAEKSTTRLGERDPDTGDLSPEAMERARLALRHCRELASSHDVEEIVCVATSAMR HHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH EAPNGLAFLEEVERDFGLKTEVISGPEEARLIYLGVLSGMDFAEQPHYILDIGGGSTELI HCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEE LADAGDARALTSSRVGAVRLQRDFIRQEPLDRKRVQFLRAFIQGSMEPAVEKVRRRLEPD EECCCCCHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCC ETPVLVATSGTAMAAAALLAVDRPELNGRLHGAEFSRAELDALVQRVLSLTPEERRALPG CCCEEEEECCHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCHHHHCCCC INARRAEIIVPGLLVLQQAMEMLGASYFVISDRALREGLIIDWMLRHDLIVDRFVYQGEI CCCCCHHEEHHHHHHHHHHHHHHCCEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHH RRRTVMHHASKYGVSITRAERIAAFALDLWDQTRGSLHQAPESSRQLLWAAAMVHRCGLR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHCCCE INTSAYHKHSWYLVQNGELLGYSHSEQRVIASLARYHRKSLPKKRHESWNLLSQEEKTLV ECCCEEECEEEEEEECCEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHH ERLSLLLRLAVAMDRRPGGAVKKVVASCTSKQLKLQLEPIDVGDDLSLELWSLQTCAPMI HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHH QSAAGLSLRSELLRSRQPLAV HHHCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10382967; 10984043 [H]