Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

Click here to switch to the map view.

The map label for this gene is 148241779

Identifier: 148241779

GI number: 148241779

Start: 615951

End: 616127

Strand: Direct

Name: 148241779

Synonym: SynRCC307_0680

Alternate gene names: NA

Gene position: 615951-616127 (Clockwise)

Preceding gene: 148241778

Following gene: 148241783

Centisome position: 27.68

GC content: 60.45

Gene sequence:

>177_bases
ATGACCTTCCTGCTACTAGCAGCTCTGGGGGTATTGATGGCCCTGATCTATCTGCCGCTGCGCATCTACCTGACCTTGAC
GGCCCGAGGCCGCCGGTTGAGGTTGCTGCAACGCATTCGTTTGCTGCGCCAGCAGCTCGGTGAAGAGCTCACCAGCCGCT
CCCAGGTCTCTAGCTAG

Upstream 100 bases:

>100_bases
GCGCGTTTGTCAAATCCATGCCCGCCTTGTGAATGGCGCTTAAGCAGGCCTGCAGAGGACTGTTCGAGTCCTTAGGGTTA
AGGAGATCCCGGCCCTCTCG

Downstream 100 bases:

>100_bases
GCCATCACCATCCCACCGTCCACCTGCAGCACCTGGCCGGTGATGTAGGCCGCGGCTGGATCAGCAGCCAAAAAGCGCAC
GGCACCCGCCACCTCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 57

Protein sequence:

>58_residues
MTFLLLAALGVLMALIYLPLRIYLTLTARGRRLRLLQRIRLLRQQLGEELTSRSQVSS

Sequences:

>Translated_58_residues
MTFLLLAALGVLMALIYLPLRIYLTLTARGRRLRLLQRIRLLRQQLGEELTSRSQVSS
>Mature_57_residues
TFLLLAALGVLMALIYLPLRIYLTLTARGRRLRLLQRIRLLRQQLGEELTSRSQVSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6697; Mature: 6566

Theoretical pI: Translated: 12.40; Mature: 12.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFLLLAALGVLMALIYLPLRIYLTLTARGRRLRLLQRIRLLRQQLGEELTSRSQVSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TFLLLAALGVLMALIYLPLRIYLTLTARGRRLRLLQRIRLLRQQLGEELTSRSQVSS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA