| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241767
Identifier: 148241767
GI number: 148241767
Start: 606437
End: 607009
Strand: Direct
Name: 148241767
Synonym: SynRCC307_0668
Alternate gene names: NA
Gene position: 606437-607009 (Clockwise)
Preceding gene: 148241766
Following gene: 148241772
Centisome position: 27.26
GC content: 58.64
Gene sequence:
>573_bases ATGTTCAAATCATTCACGATCGCGGAGGGCATCCTGCTGATCGTTCTCGGCGTTCTGGCTTTGATCGCTCCCATCAAAGC CTCCTTCATCGTCACCGCCGTTCTGGGTGTTGTCTTCCTGGTGGGAGGCATCATCGGCTGGATTAACAACCTCAGCCGCA GCCGCGGCATGAAGGGCTGGTTGGTGTTTTGGCGTCTGGTTGTCTCCACCCTGTTCCTGGTGGCTGGCTGGACCATCCTT GATCAGTTCTCAACCGGAGCCATTGATGCGGCCGCTCAGGTGGCCACCCTCAGCCTGGCTGTGGGCATCGTCTTTTTGGT GGAAGGCATCGTCGCCATCATTGCCTCACTGGGTCACCAGGAGGTGGAAGGCTGGCGCTGGGGTTTGGCCAACGGAATCA TCACCTTGATCCTGGGCTTGATCATCCTGTCGATGAAGGCCTTTGGTCTGCTCTCGGTGCTCGGGATCCTGGTGGGGATC AGCTTCATCTTCTCGGGGATTGATCTGATCGCCTTCGCCAGCAGCTTCCACGGGCCTGACGACAACGATGGCCCTCAGGC ATCCGCTGCCTGA
Upstream 100 bases:
>100_bases GGAACGTCTCCTGCCTGGGTCGGCTTCAGCTGATCTGACGTCCCAGTGGATGGCCGAGAATGGTTGGAATGTCTAGCTTT TGGGGGCGTCCCTCGCTCCC
Downstream 100 bases:
>100_bases TTGCTCGGCTCATCCTCTAGTGCTGCGTCATCCACGACGAGATCGTCGGGGAGGCGCAGCCAAATGGTGCCGGTTTCCTC GTGCAGCTCGATCGTGCACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MFKSFTIAEGILLIVLGVLALIAPIKASFIVTAVLGVVFLVGGIIGWINNLSRSRGMKGWLVFWRLVVSTLFLVAGWTIL DQFSTGAIDAAAQVATLSLAVGIVFLVEGIVAIIASLGHQEVEGWRWGLANGIITLILGLIILSMKAFGLLSVLGILVGI SFIFSGIDLIAFASSFHGPDDNDGPQASAA
Sequences:
>Translated_190_residues MFKSFTIAEGILLIVLGVLALIAPIKASFIVTAVLGVVFLVGGIIGWINNLSRSRGMKGWLVFWRLVVSTLFLVAGWTIL DQFSTGAIDAAAQVATLSLAVGIVFLVEGIVAIIASLGHQEVEGWRWGLANGIITLILGLIILSMKAFGLLSVLGILVGI SFIFSGIDLIAFASSFHGPDDNDGPQASAA >Mature_190_residues MFKSFTIAEGILLIVLGVLALIAPIKASFIVTAVLGVVFLVGGIIGWINNLSRSRGMKGWLVFWRLVVSTLFLVAGWTIL DQFSTGAIDAAAQVATLSLAVGIVFLVEGIVAIIASLGHQEVEGWRWGLANGIITLILGLIILSMKAFGLLSVLGILVGI SFIFSGIDLIAFASSFHGPDDNDGPQASAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19908; Mature: 19908
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKSFTIAEGILLIVLGVLALIAPIKASFIVTAVLGVVFLVGGIIGWINNLSRSRGMKGW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVFWRLVVSTLFLVAGWTILDQFSTGAIDAAAQVATLSLAVGIVFLVEGIVAIIASLGHQ HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH EVEGWRWGLANGIITLILGLIILSMKAFGLLSVLGILVGISFIFSGIDLIAFASSFHGPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DNDGPQASAA CCCCCCCCCC >Mature Secondary Structure MFKSFTIAEGILLIVLGVLALIAPIKASFIVTAVLGVVFLVGGIIGWINNLSRSRGMKGW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LVFWRLVVSTLFLVAGWTILDQFSTGAIDAAAQVATLSLAVGIVFLVEGIVAIIASLGHQ HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH EVEGWRWGLANGIITLILGLIILSMKAFGLLSVLGILVGISFIFSGIDLIAFASSFHGPD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DNDGPQASAA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA