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The map label for this gene is yebA [C]

Identifier: 148241756

GI number: 148241756

Start: 595217

End: 596014

Strand: Direct

Name: yebA [C]

Synonym: SynRCC307_0657

Alternate gene names: 148241756

Gene position: 595217-596014 (Clockwise)

Preceding gene: 148241755

Following gene: 148241759

Centisome position: 26.75

GC content: 67.92

Gene sequence:

>798_bases
GTGCTGGTCCTGCTCCCCTTGCTGGCACAGCTGCCAACTCCCTCGCTGCAGCAGTTGGAGCAGCAGCAGGTGATCACGCC
GGCTGAGCGCCGGCGCCTGGAGAGTGGTTCCCTGCGAGCGGCGCCAACCCCTGCGGTGCAGCGCCTCTGCCAGCAAGAAG
GTGGTGCGGTGAGCCGGCAGGAATGCACCGCAGCGGTGGCGCCCAATCCGCTGCAGGTGCCTGTTTCAGCCTTGCTGGGG
GGATTGGATGGGTCCTTCTCGCTGCAACAGGTGCTGCGGGTCACCCCGCGGCCAGCGCCGCTGGGGGGCAATGGCAACCA
GGCCCTGCTGTTCCCCTTGATTGGATCGGCCTTCACCAGCAGTGGTTTTGGCTGGCGTCAGCACCCGGTGCTGGGCGGGT
TGATGCTGCATGCCGGCCGTGATCTAGCGGCTCCCCAGGGCACCCCCGTGGTGGCGGCCCTGGGCGGCACGGTGCGTTCA
GCCGGTTTGGCTGGCGGGTATGGCGTGGCCATCGAGCTGGACCACCAAGAGCCCCAGCGGCAGCGCACCCTTTATGGCCA
TCTCTCGGAGCTCTACGTGGAGCCTGGCGATGCCGTTCAACAGGGGGAGGTGATTGGCCGAGTGGGCAGCACGGGCTTGA
GCACCGGCCCCCATTTGCATTTCGAGTTGCGCCGCCCGCAAGCCGGCGGCTGGGTGGCCGTTGATCCTGGCCGCCTGCTG
CCCGATGGCATGGAGGTTGATCCAGCCAGTGCCGTCGCGGCCCTGCTCAATCAGATGCTGCGCGGATTGGAGCGCTGA

Upstream 100 bases:

>100_bases
TCCCCGCTTTGATCAATTGCTGCTGATTGGCCTGGGCGCTATCGAACGGCTGGCCCGCGAGGCTGGCAACTGGGACACTG
AGCCCTGCTTGTGAGCTGTT

Downstream 100 bases:

>100_bases
GGCTCAGTTGGCGATGCGTCCGTCGCGGAACAGCACCCGCTGTTTGGCCCGCTCGGCCACATCGTGCTCGTGGGTCACCA
GCACCACGGTCATGCCATCG

Product: putative metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MLVLLPLLAQLPTPSLQQLEQQQVITPAERRRLESGSLRAAPTPAVQRLCQQEGGAVSRQECTAAVAPNPLQVPVSALLG
GLDGSFSLQQVLRVTPRPAPLGGNGNQALLFPLIGSAFTSSGFGWRQHPVLGGLMLHAGRDLAAPQGTPVVAALGGTVRS
AGLAGGYGVAIELDHQEPQRQRTLYGHLSELYVEPGDAVQQGEVIGRVGSTGLSTGPHLHFELRRPQAGGWVAVDPGRLL
PDGMEVDPASAVAALLNQMLRGLER

Sequences:

>Translated_265_residues
MLVLLPLLAQLPTPSLQQLEQQQVITPAERRRLESGSLRAAPTPAVQRLCQQEGGAVSRQECTAAVAPNPLQVPVSALLG
GLDGSFSLQQVLRVTPRPAPLGGNGNQALLFPLIGSAFTSSGFGWRQHPVLGGLMLHAGRDLAAPQGTPVVAALGGTVRS
AGLAGGYGVAIELDHQEPQRQRTLYGHLSELYVEPGDAVQQGEVIGRVGSTGLSTGPHLHFELRRPQAGGWVAVDPGRLL
PDGMEVDPASAVAALLNQMLRGLER
>Mature_265_residues
MLVLLPLLAQLPTPSLQQLEQQQVITPAERRRLESGSLRAAPTPAVQRLCQQEGGAVSRQECTAAVAPNPLQVPVSALLG
GLDGSFSLQQVLRVTPRPAPLGGNGNQALLFPLIGSAFTSSGFGWRQHPVLGGLMLHAGRDLAAPQGTPVVAALGGTVRS
AGLAGGYGVAIELDHQEPQRQRTLYGHLSELYVEPGDAVQQGEVIGRVGSTGLSTGPHLHFELRRPQAGGWVAVDPGRLL
PDGMEVDPASAVAALLNQMLRGLER

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=116, Percent_Identity=40.5172413793103, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 27767; Mature: 27767

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLLPLLAQLPTPSLQQLEQQQVITPAERRRLESGSLRAAPTPAVQRLCQQEGGAVSRQ
CEEEEEHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHH
ECTAAVAPNPLQVPVSALLGGLDGSFSLQQVLRVTPRPAPLGGNGNQALLFPLIGSAFTS
HHHHHCCCCCCEECHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHC
SGFGWRQHPVLGGLMLHAGRDLAAPQGTPVVAALGGTVRSAGLAGGYGVAIELDHQEPQR
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCCEEEEEEECCCCCHH
QRTLYGHLSELYVEPGDAVQQGEVIGRVGSTGLSTGPHLHFELRRPQAGGWVAVDPGRLL
HHHHHHHHHHHHCCCCCCHHHCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC
PDGMEVDPASAVAALLNQMLRGLER
CCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLVLLPLLAQLPTPSLQQLEQQQVITPAERRRLESGSLRAAPTPAVQRLCQQEGGAVSRQ
CEEEEEHHHHCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHH
ECTAAVAPNPLQVPVSALLGGLDGSFSLQQVLRVTPRPAPLGGNGNQALLFPLIGSAFTS
HHHHHCCCCCCEECHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHC
SGFGWRQHPVLGGLMLHAGRDLAAPQGTPVVAALGGTVRSAGLAGGYGVAIELDHQEPQR
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHCCCCCCEEEEEEECCCCCHH
QRTLYGHLSELYVEPGDAVQQGEVIGRVGSTGLSTGPHLHFELRRPQAGGWVAVDPGRLL
HHHHHHHHHHHHCCCCCCHHHCHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCC
PDGMEVDPASAVAALLNQMLRGLER
CCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]