Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241722

Identifier: 148241722

GI number: 148241722

Start: 558953

End: 559240

Strand: Direct

Name: 148241722

Synonym: SynRCC307_0623

Alternate gene names: NA

Gene position: 558953-559240 (Clockwise)

Preceding gene: 148241721

Following gene: 148241723

Centisome position: 25.12

GC content: 62.85

Gene sequence:

>288_bases
GTGATGGCGATGGCTGATCTGAGCTGGCCAGCGCTGACATTGATCACCCGCCAAGGCTGCTGCTTGTGTGAGGGTCTGCA
AGAGCGGCTTGAGGCGTTGGATCCCGCCCCACCGCTGCAGTGCGTGGATGTGGATGGCGATGCGCAGTTGCAGGCGCGGT
TTGGTTTGGAGGTGCCTGTGCTGATGACCGCCTCTGGTGAGGTGTTGGCGCGGGTGCCGCCCCGCCTGAGTGGTGACCGA
CTCGCTGATTGGTTGCAGAGGAGCCTCAACAGCAGCAATTCCGCCTAA

Upstream 100 bases:

>100_bases
CGGTCCAGCGCCATGGGGCCCTGCGCGGCAGCTGGCTCACCTTGAAGCGGTTGTTGCGCTGCCATCCCTTTGCCGAAGGC
GGCTATGACCCGGTGCCGGA

Downstream 100 bases:

>100_bases
AACTCGATGGCCACCACCTCCTTCGCGGCATGGCTTCTGAGGCATCGCGCTTGCATCTCCTGATTCGGGATGCCGGTTTG
AGCGTTCCCCAGCAGCTGCC

Product: thioredoxin family protein

Products: NA

Alternate protein names: Thioredoxin Family Protein; Glutaredoxin Domain Family Protein

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPVLMTASGEVLARVPPRLSGDR
LADWLQRSLNSSNSA

Sequences:

>Translated_95_residues
MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPVLMTASGEVLARVPPRLSGDR
LADWLQRSLNSSNSA
>Mature_95_residues
MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPVLMTASGEVLARVPPRLSGDR
LADWLQRSLNSSNSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10252; Mature: 10252

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPV
CCCCCCCCCCHHEEHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCE
LMTASGEVLARVPPRLSGDRLADWLQRSLNSSNSA
EEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPV
CCCCCCCCCCHHEEHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCE
LMTASGEVLARVPPRLSGDRLADWLQRSLNSSNSA
EEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA