| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241722
Identifier: 148241722
GI number: 148241722
Start: 558953
End: 559240
Strand: Direct
Name: 148241722
Synonym: SynRCC307_0623
Alternate gene names: NA
Gene position: 558953-559240 (Clockwise)
Preceding gene: 148241721
Following gene: 148241723
Centisome position: 25.12
GC content: 62.85
Gene sequence:
>288_bases GTGATGGCGATGGCTGATCTGAGCTGGCCAGCGCTGACATTGATCACCCGCCAAGGCTGCTGCTTGTGTGAGGGTCTGCA AGAGCGGCTTGAGGCGTTGGATCCCGCCCCACCGCTGCAGTGCGTGGATGTGGATGGCGATGCGCAGTTGCAGGCGCGGT TTGGTTTGGAGGTGCCTGTGCTGATGACCGCCTCTGGTGAGGTGTTGGCGCGGGTGCCGCCCCGCCTGAGTGGTGACCGA CTCGCTGATTGGTTGCAGAGGAGCCTCAACAGCAGCAATTCCGCCTAA
Upstream 100 bases:
>100_bases CGGTCCAGCGCCATGGGGCCCTGCGCGGCAGCTGGCTCACCTTGAAGCGGTTGTTGCGCTGCCATCCCTTTGCCGAAGGC GGCTATGACCCGGTGCCGGA
Downstream 100 bases:
>100_bases AACTCGATGGCCACCACCTCCTTCGCGGCATGGCTTCTGAGGCATCGCGCTTGCATCTCCTGATTCGGGATGCCGGTTTG AGCGTTCCCCAGCAGCTGCC
Product: thioredoxin family protein
Products: NA
Alternate protein names: Thioredoxin Family Protein; Glutaredoxin Domain Family Protein
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPVLMTASGEVLARVPPRLSGDR LADWLQRSLNSSNSA
Sequences:
>Translated_95_residues MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPVLMTASGEVLARVPPRLSGDR LADWLQRSLNSSNSA >Mature_95_residues MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPVLMTASGEVLARVPPRLSGDR LADWLQRSLNSSNSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10252; Mature: 10252
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPV CCCCCCCCCCHHEEHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCE LMTASGEVLARVPPRLSGDRLADWLQRSLNSSNSA EEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMAMADLSWPALTLITRQGCCLCEGLQERLEALDPAPPLQCVDVDGDAQLQARFGLEVPV CCCCCCCCCCHHEEHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCE LMTASGEVLARVPPRLSGDRLADWLQRSLNSSNSA EEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA