| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241670
Identifier: 148241670
GI number: 148241670
Start: 507135
End: 507407
Strand: Direct
Name: 148241670
Synonym: SynRCC307_0571
Alternate gene names: NA
Gene position: 507135-507407 (Clockwise)
Preceding gene: 148241668
Following gene: 148241672
Centisome position: 22.79
GC content: 59.34
Gene sequence:
>273_bases ATGGGCGTTTCGCTACTTCTCATCGGACTCACAGGCTTGTTCTGGTTCCTCGGCATGCGCAATGCCGATGAGGTGATCGG CATCCTCGAAAAGCTGATGGCCACCTTGCTGTTGGTGCTGACGCTGTGCGTTGGTGGCGGCCATGTGGCCATCAGCTTGC TGCTGTTGGCGGTGGCCTTGAGCCTGCCCCGTGCCCGCGCCTTTGCCTCCACGCGCTTTCGCTCCAACAGCAAGATCACC CGCGAGAGCGGTGAGTTGTTTTTGCCTTTTTGA
Upstream 100 bases:
>100_bases ACAGGCTCAGCGTCAGCACTGCCCAGCGACGCCATTGCATGGGGTAACGCTGCAGCGCAGCAAATGAGCTCATAAATTAG AAACATCCACTGGCCTTGCG
Downstream 100 bases:
>100_bases GCGGAGCGCTCAGCAGCGCAGCTTCACGGTGCGCGGCAGCTCTTCTAAAAGCTCCCCTTCTTCGCTGAGGCCTGGATAGG GGCGGCCCGTGTCGCGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MGVSLLLIGLTGLFWFLGMRNADEVIGILEKLMATLLLVLTLCVGGGHVAISLLLLAVALSLPRARAFASTRFRSNSKIT RESGELFLPF
Sequences:
>Translated_90_residues MGVSLLLIGLTGLFWFLGMRNADEVIGILEKLMATLLLVLTLCVGGGHVAISLLLLAVALSLPRARAFASTRFRSNSKIT RESGELFLPF >Mature_89_residues GVSLLLIGLTGLFWFLGMRNADEVIGILEKLMATLLLVLTLCVGGGHVAISLLLLAVALSLPRARAFASTRFRSNSKITR ESGELFLPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9703; Mature: 9572
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSLLLIGLTGLFWFLGMRNADEVIGILEKLMATLLLVLTLCVGGGHVAISLLLLAVAL CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SLPRARAFASTRFRSNSKITRESGELFLPF HCCHHHHHHHHHHCCCCCCCCCCCCEECCC >Mature Secondary Structure GVSLLLIGLTGLFWFLGMRNADEVIGILEKLMATLLLVLTLCVGGGHVAISLLLLAVAL CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH SLPRARAFASTRFRSNSKITRESGELFLPF HCCHHHHHHHHHHCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA