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The map label for this gene is dppC [H]

Identifier: 148241668

GI number: 148241668

Start: 504385

End: 505257

Strand: Direct

Name: dppC [H]

Synonym: SynRCC307_0569

Alternate gene names: 148241668

Gene position: 504385-505257 (Clockwise)

Preceding gene: 148241667

Following gene: 148241670

Centisome position: 22.67

GC content: 62.66

Gene sequence:

>873_bases
ATGGCATCCCTCTGGCTGCAACGCTTCTGGACCTGGCGTCCGCGGTCCCTTTCAGCCCGCTTGGCCCGCGTGGGCCTGTG
GGTGCTGCTCTTTTATGTGCTGATTGCCCTGATCAGCCCAGTGCTCTTTGGCATTGGCCTGCTGCCGGATGTGAACACCG
GCCTGGAGAACGAGATCAATGCGCCGCCCTCGCTGGAGCACTGGTGCGGGACCAATCGTTTGGGTCAAGACGTTTGTGCT
CGCACCATTGCTGGCGCCGGTGTGGCGCTGAAGGTGGTGGTGCTGGCGCTCACCTTGGCCTTGATCGTTGGTGTGCCGCT
GGGGATGCTCAGCGGTTATTTCGGTGGGCCGGTGGATCGTGCCTTGGTGCTGCTGATGGACACCGTGTATTCGCTGCCGG
TGGTGCTGCTGGCGGTGGTGATGGCGTTTCTGTTGGGTCAGGGGCTGCTTAATGCCGCCGCAGCGTTGTGCGTGGTTTAT
GTGCCGCAGTACTTCCGCGTCGTGCGCAACCAAACGGCCTCGGTGAAAGCCGAACTGTTTGTGGAAGCGGCTCAGAGCCT
GGGTGCTGGGCCGGTGTGGATCATGCGCAAATACCTGTTCCGCAACGTGATCACCTCGGTGCCGGTGGTGCTCACCATGA
ATGCGGCGGATTCAGTGTTGATGCTGGGCAGCCTTGGTTTTTTGGGCCTGGGCCTGCCGGCCGTTGTTCCCGAATGGGGC
GCTGAGCTCAAGCAGGCGCTCACGGCGCTGCCCACCGGGATCTGGTGGACCGCGCTCTACCCCGGGGTGGCCATGTTCAT
CCTGGTGCTGGCGCTCTCATTCATTGGCGAAGGCCTTGATGCTTGGGTGAGCGGCGATGAAGCCAGGCCCTGA

Upstream 100 bases:

>100_bases
AATCAAGGTGGGAATTATGGATATGGTTATCAGCCTTCCACTCAAGAGGCTAAGAAGCTGATTTATCAGCCTTAGAGAGA
GCCTCGATTACGGTCGGCCC

Downstream 100 bases:

>100_bases
AGCTCAAGAGGCAGCAGGCTTCTGTTGAACCAGGTTTCAGGTCTGGCTGGTGTGATCAGGCGGAGCAAAACAGGGCCCAA
GGCGCGCAGCTCGAAAGGCG

Product: ABC-type dipeptide/oligopeptide/nickel transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MASLWLQRFWTWRPRSLSARLARVGLWVLLFYVLIALISPVLFGIGLLPDVNTGLENEINAPPSLEHWCGTNRLGQDVCA
RTIAGAGVALKVVVLALTLALIVGVPLGMLSGYFGGPVDRALVLLMDTVYSLPVVLLAVVMAFLLGQGLLNAAAALCVVY
VPQYFRVVRNQTASVKAELFVEAAQSLGAGPVWIMRKYLFRNVITSVPVVLTMNAADSVLMLGSLGFLGLGLPAVVPEWG
AELKQALTALPTGIWWTALYPGVAMFILVLALSFIGEGLDAWVSGDEARP

Sequences:

>Translated_290_residues
MASLWLQRFWTWRPRSLSARLARVGLWVLLFYVLIALISPVLFGIGLLPDVNTGLENEINAPPSLEHWCGTNRLGQDVCA
RTIAGAGVALKVVVLALTLALIVGVPLGMLSGYFGGPVDRALVLLMDTVYSLPVVLLAVVMAFLLGQGLLNAAAALCVVY
VPQYFRVVRNQTASVKAELFVEAAQSLGAGPVWIMRKYLFRNVITSVPVVLTMNAADSVLMLGSLGFLGLGLPAVVPEWG
AELKQALTALPTGIWWTALYPGVAMFILVLALSFIGEGLDAWVSGDEARP
>Mature_289_residues
ASLWLQRFWTWRPRSLSARLARVGLWVLLFYVLIALISPVLFGIGLLPDVNTGLENEINAPPSLEHWCGTNRLGQDVCAR
TIAGAGVALKVVVLALTLALIVGVPLGMLSGYFGGPVDRALVLLMDTVYSLPVVLLAVVMAFLLGQGLLNAAAALCVVYV
PQYFRVVRNQTASVKAELFVEAAQSLGAGPVWIMRKYLFRNVITSVPVVLTMNAADSVLMLGSLGFLGLGLPAVVPEWGA
ELKQALTALPTGIWWTALYPGVAMFILVLALSFIGEGLDAWVSGDEARP

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=223, Percent_Identity=34.0807174887892, Blast_Score=148, Evalue=4e-37,
Organism=Escherichia coli, GI1787760, Length=218, Percent_Identity=30.7339449541284, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1789964, Length=281, Percent_Identity=33.0960854092527, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1789889, Length=220, Percent_Identity=33.6363636363636, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1787498, Length=269, Percent_Identity=30.1115241635688, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1787549, Length=224, Percent_Identity=29.0178571428571, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1788505, Length=241, Percent_Identity=26.5560165975104, Blast_Score=78, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31085; Mature: 30954

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLWLQRFWTWRPRSLSARLARVGLWVLLFYVLIALISPVLFGIGLLPDVNTGLENEIN
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
APPSLEHWCGTNRLGQDVCARTIAGAGVALKVVVLALTLALIVGVPLGMLSGYFGGPVDR
CCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALVLLMDTVYSLPVVLLAVVMAFLLGQGLLNAAAALCVVYVPQYFRVVRNQTASVKAELF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VEAAQSLGAGPVWIMRKYLFRNVITSVPVVLTMNAADSVLMLGSLGFLGLGLPAVVPEWG
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCHHHHCCHHH
AELKQALTALPTGIWWTALYPGVAMFILVLALSFIGEGLDAWVSGDEARP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure 
ASLWLQRFWTWRPRSLSARLARVGLWVLLFYVLIALISPVLFGIGLLPDVNTGLENEIN
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
APPSLEHWCGTNRLGQDVCARTIAGAGVALKVVVLALTLALIVGVPLGMLSGYFGGPVDR
CCCCHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ALVLLMDTVYSLPVVLLAVVMAFLLGQGLLNAAAALCVVYVPQYFRVVRNQTASVKAELF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VEAAQSLGAGPVWIMRKYLFRNVITSVPVVLTMNAADSVLMLGSLGFLGLGLPAVVPEWG
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCHHHHCCHHH
AELKQALTALPTGIWWTALYPGVAMFILVLALSFIGEGLDAWVSGDEARP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]