| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241551
Identifier: 148241551
GI number: 148241551
Start: 424514
End: 425566
Strand: Direct
Name: 148241551
Synonym: SynRCC307_0452
Alternate gene names: NA
Gene position: 424514-425566 (Clockwise)
Preceding gene: 148241545
Following gene: 148241552
Centisome position: 19.08
GC content: 65.53
Gene sequence:
>1053_bases TTGGTCGCTACGCCAGCCAGCCTTGAGGCACCCACGCTGCATCTCGACCTGCCCGATCCCGAGCAGGACGACCTCAGCAC CCTGGAGTTCCACGCCCGCTTGGAGCAGGCCTGGGAGCTGTGCGACCGCTTTGACCTGCAGACCGAAATTTGGCGCGGAC GGATCTTGGCGGCGGTGCGGGATCGCGAGAAGCGTGGTGGCGAGGGCCGTGGCGCTGGCTTCCTGCAGTGGCTCAGGGAG CGGGAAATCAGTAAGACCCGGGCCTACAGCCTGATCCAGCTGGCTGAATCAGCTAACAGCCTGGTGGGCGACGGGCTGCT GGAGGAGAGCAGCGTCAACAACTTCTCCAAGCGCGCCTTTGTGGAAACCGCTCAGGCTGATCCGGAGGTGCAGCAGATGA TCAGCGAGGCGGCCAACGAGGGTCAGCAGATCACCCGGAAGCAGGTGCGCCGCCTCACCGATGAATTCACGGCCGCCACC AGTCCGCTCCTGCCCGATGAGATTCGCGAGCGCACGCAGCAGAATCTGCTTCCCCCGAAGGCTGTGGCCCCATTGGTGCG GGAACTGGCGCGGTTGCCGGAACCCCAACAGGAGGACCTGCGCCGAGTTTTGAAGGAGGAACCCGAGCTCGATCGCATCA AGGACGTCACAGCCACAGCCCGTTGGCTCAGCAAGGCGGCGGAAGCGGGCATGGCCGTGCGGGCGCTCCAGCACGAGAGC ATCGATTTGGAAAAGGCGATGCAGGAAGCCACCCGCCTGGACATGCTCGGGTTGGTGGCGGATGTGGTGGGCCAAGCGCA GCAGCTGGAGCAGGCTGTGCTGAAGCTGCACACCAGCTGGCGCCGCCTGGGCGGTTTGCATGAGCGCCTCTGGCTGGAAA GTGGCAGCAGCACGCCCTATCTGCGCAGCCTGTTGCAGGGCCTAGAAACCCTCAGCGGCAGCAATCTGCGCGTGTCGCTC GGGGAGCTTGCTGGCGGCAAGCGCTTGCGGCTTCAGCTGGTGGAAGAGGGGGCAGATCAGCTGGAGGCGCCACCGCTGCA GCAGGCCGCCTGA
Upstream 100 bases:
>100_bases TGTCGGCAGAACAAGGTTCGTTCGTTCAGAAACTTACCTGTGCTGACGCAATCGTTCGATGAGCCGTCATGATTCGTCGC GGCCCCCCGCTTGATCTGCT
Downstream 100 bases:
>100_bases GGCCTTGCGCCCCGGGGGGCAACCGGTACCGTCCGTGGGTGAAGGAATCCAGTGCATCTCTGCTGCAGTCGCTGCAGCAG CACTTCGGTTACAGCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MVATPASLEAPTLHLDLPDPEQDDLSTLEFHARLEQAWELCDRFDLQTEIWRGRILAAVRDREKRGGEGRGAGFLQWLRE REISKTRAYSLIQLAESANSLVGDGLLEESSVNNFSKRAFVETAQADPEVQQMISEAANEGQQITRKQVRRLTDEFTAAT SPLLPDEIRERTQQNLLPPKAVAPLVRELARLPEPQQEDLRRVLKEEPELDRIKDVTATARWLSKAAEAGMAVRALQHES IDLEKAMQEATRLDMLGLVADVVGQAQQLEQAVLKLHTSWRRLGGLHERLWLESGSSTPYLRSLLQGLETLSGSNLRVSL GELAGGKRLRLQLVEEGADQLEAPPLQQAA
Sequences:
>Translated_350_residues MVATPASLEAPTLHLDLPDPEQDDLSTLEFHARLEQAWELCDRFDLQTEIWRGRILAAVRDREKRGGEGRGAGFLQWLRE REISKTRAYSLIQLAESANSLVGDGLLEESSVNNFSKRAFVETAQADPEVQQMISEAANEGQQITRKQVRRLTDEFTAAT SPLLPDEIRERTQQNLLPPKAVAPLVRELARLPEPQQEDLRRVLKEEPELDRIKDVTATARWLSKAAEAGMAVRALQHES IDLEKAMQEATRLDMLGLVADVVGQAQQLEQAVLKLHTSWRRLGGLHERLWLESGSSTPYLRSLLQGLETLSGSNLRVSL GELAGGKRLRLQLVEEGADQLEAPPLQQAA >Mature_350_residues MVATPASLEAPTLHLDLPDPEQDDLSTLEFHARLEQAWELCDRFDLQTEIWRGRILAAVRDREKRGGEGRGAGFLQWLRE REISKTRAYSLIQLAESANSLVGDGLLEESSVNNFSKRAFVETAQADPEVQQMISEAANEGQQITRKQVRRLTDEFTAAT SPLLPDEIRERTQQNLLPPKAVAPLVRELARLPEPQQEDLRRVLKEEPELDRIKDVTATARWLSKAAEAGMAVRALQHES IDLEKAMQEATRLDMLGLVADVVGQAQQLEQAVLKLHTSWRRLGGLHERLWLESGSSTPYLRSLLQGLETLSGSNLRVSL GELAGGKRLRLQLVEEGADQLEAPPLQQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39106; Mature: 39106
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVATPASLEAPTLHLDLPDPEQDDLSTLEFHARLEQAWELCDRFDLQTEIWRGRILAAVR CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DREKRGGEGRGAGFLQWLREREISKTRAYSLIQLAESANSLVGDGLLEESSVNNFSKRAF HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHH VETAQADPEVQQMISEAANEGQQITRKQVRRLTDEFTAATSPLLPDEIRERTQQNLLPPK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH AVAPLVRELARLPEPQQEDLRRVLKEEPELDRIKDVTATARWLSKAAEAGMAVRALQHES HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDLEKAMQEATRLDMLGLVADVVGQAQQLEQAVLKLHTSWRRLGGLHERLWLESGSSTPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHH LRSLLQGLETLSGSNLRVSLGELAGGKRLRLQLVEEGADQLEAPPLQQAA HHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHHHHHHCHHHCCCCCHHCCC >Mature Secondary Structure MVATPASLEAPTLHLDLPDPEQDDLSTLEFHARLEQAWELCDRFDLQTEIWRGRILAAVR CCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DREKRGGEGRGAGFLQWLREREISKTRAYSLIQLAESANSLVGDGLLEESSVNNFSKRAF HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHH VETAQADPEVQQMISEAANEGQQITRKQVRRLTDEFTAATSPLLPDEIRERTQQNLLPPK HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHH AVAPLVRELARLPEPQQEDLRRVLKEEPELDRIKDVTATARWLSKAAEAGMAVRALQHES HHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IDLEKAMQEATRLDMLGLVADVVGQAQQLEQAVLKLHTSWRRLGGLHERLWLESGSSTPY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHH LRSLLQGLETLSGSNLRVSLGELAGGKRLRLQLVEEGADQLEAPPLQQAA HHHHHHHHHHHCCCCEEEEHHHHCCCCHHHHHHHHHCHHHCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA