Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241463

Identifier: 148241463

GI number: 148241463

Start: 353974

End: 354906

Strand: Direct

Name: 148241463

Synonym: SynRCC307_0364

Alternate gene names: NA

Gene position: 353974-354906 (Clockwise)

Preceding gene: 148241460

Following gene: 148241470

Centisome position: 15.91

GC content: 52.95

Gene sequence:

>933_bases
ATGAGTTTGCTTCAACGCGCCAGACATCAATTACAGCTTGCTTGCCAGGTGTGGAATCGCCATGGCTGTGTTGATCTGAG
TGCAGCTTTTGCGTTCCATAGTCTCCAATCTTTTTTCCCTTTTTTGTTGGTGTGCCTGGGTGTTGGGGCACGTTTATTCG
GGCAAGTTGATGGTGCGAGTGATCAATTACTGGCCGTAGCCGCTGGTGTTTTACCGCCTGGTGGCTTGGAAGTGATGGAA
GGAATCTTGCAGCGTTTGGTGAATCAGGGTCAGGTGGCTGAGCAGATTGGTGGTTTGGTCTTAATTTTTAGTGCCAGTAA
CGCCACGTTGTCGTTGCAGCGTGGGGCCGATCGTCTTTGGTATGGATTGGCGTTGCCCAATGCTGGTGATCAAGCTTGGC
ATTGGCATCTTCGCCGCTGGTTCTTTCAACGTCTCAAGGCCATTGGTGCTGCTTTGCTGTTGGCATTGGTGCTGTTAATT
AACCAAATCACCACGCCATTTCGTCTGCTTTGGTCGTCGATGTGGTCGAGTTTGGGTTCATTATCTCCCTGGTTACCGCA
GCCCTGGGAGGTGCCTGCCCGCACCTTGATTTCGGTGCTTGGTAGTTGGTTGGGTGTGGTGATTGCCACCGTGCTGTTGT
TTTCTTATTTGCCCAGTCGCAGGCCCCGGCTGGGCTTGCTGTGGCAAGGTTCCTTGCTGGTGGCCACGGGTCTCACCTTA
GTGAACCCACTACTGGGGAGGGCTTTGGTCTGGGCTGGCTCGCGCTTTTTGGCCTATGGCCTCGTTGGCGGAATTATTCT
TCTCACGCTTTGGATTTGGTTATTGGGCCTGATTTTGTATTTCGGGATGGCTTGGACCGTTGCGTTGACGCAGCGTCGTC
AGCCGCAGTTGTTGTTAGCCAACGATGCCCAATCAGCTGAGGCTGATCTCTAG

Upstream 100 bases:

>100_bases
GGGGTGGCCCCCCGTGAAAATAGCTCAATGCCAGGTAAAAATTTCCTTTACTTCATCAAAGCCATCCCGTGACGGGGTGG
CTTTTTTTGTGTCTATTCGC

Downstream 100 bases:

>100_bases
CCCGCAGTATCTGCGTTGATATCCAGAACAACAACATCGACTGGGTCAACGCGTCCATGGTCATCGAGAAAGCGTTTGTA
TTCCCGTGCCGTGTGCCGCA

Product: ribonuclease BN-like family protein

Products: NA

Alternate protein names: Ribonuclease BN-Like Family Protein; YihY Family Protein; Serum Resistance Locus BrkB-Like; Serum Resistance Locus BrkB

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MSLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGVLPPGGLEVME
GILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLI
NQITTPFRLLWSSMWSSLGSLSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL
VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLANDAQSAEADL

Sequences:

>Translated_310_residues
MSLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGVLPPGGLEVME
GILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLI
NQITTPFRLLWSSMWSSLGSLSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL
VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLANDAQSAEADL
>Mature_309_residues
SLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGVLPPGGLEVMEG
ILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLIN
QITTPFRLLWSSMWSSLGSLSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTLV
NPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLANDAQSAEADL

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34044; Mature: 33912

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGAS
CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DQLLAVAAGVLPPGGLEVMEGILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLW
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCEEEHHCCCCHHE
YGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLINQITTPFRLLWSSMWSSLGS
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
LSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH
VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
NDAQSAEADL
CCCCCCCCCC
>Mature Secondary Structure 
SLLQRARHQLQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGAS
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DQLLAVAAGVLPPGGLEVMEGILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLW
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCEEEHHCCCCHHE
YGLALPNAGDQAWHWHLRRWFFQRLKAIGAALLLALVLLINQITTPFRLLWSSMWSSLGS
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
LSPWLPQPWEVPARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHH
VNPLLGRALVWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQPQLLLA
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE
NDAQSAEADL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA