| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241301
Identifier: 148241301
GI number: 148241301
Start: 204836
End: 205603
Strand: Direct
Name: 148241301
Synonym: SynRCC307_0202
Alternate gene names: NA
Gene position: 204836-205603 (Clockwise)
Preceding gene: 148241300
Following gene: 148241302
Centisome position: 9.21
GC content: 37.63
Gene sequence:
>768_bases ATGACAGCTACCCTTTTTCTTTGTTGTCCATCTTTGAGCTTCTCAGGGAGCACAGCTCGTACAGCTAATTCATTTAACCG TCTAAAAAACCTTCTTAGTGTGTTTGATATTTCAGTCAAAACACTCTTTCTTTCTTCTGATCAGAATGATCTTGCTTCTG CTGAGGCGCACTCATACTTCGACTATATATTTTTTTCTCCATGTGAAGGAGTTTATGCAGCTTTCAATGCAGCCATCAAA AAATCCCTCAGTCTTTCTGCTGATTGGATATGGCTTTTGGGAGAAGGAGATACAATTTTATGTGAACGTCTAGACTTGTC TATTTTGTCCCAAAATCTTTCCTTGGGATCGCATATATTGATGATGAACATGTTCGTGGGTGATAGAAAACTAAGGTGCA AACTAAAAGAAGCTTTCCCATCTCCGTTGTTTAGTCTTGATACAATGAGATTTAACCATCCTGCATCTATTATTTCTGCA AATGCTTATTCTATCAATGGCTTGTACTCACTTGATTATAAGGTTGTCTCTGACTATTATTGGTTGCACAAGGCTTGTGC TGCCAATCTATCGATTACCCATTTGCCTTTTGTATCCGTCTACCATGAATTAGGTGGCATTTCTACCTCCTCAGGTAAAT CGCGTTTTTTCGAGCATTATCAATGTTTGCTTGCTTTAAACAGAGTATATGGTTTTTCCTTTTCTGTTTTCTTTGCGCTC ATTTTTCGTTTAACAAGGTGTCTTGTTTCTAGTTTTTTCGCTAAATGA
Upstream 100 bases:
>100_bases AGGCTATTTCTAAGCTTTGGCTTAATCGTATTTCGGAAACTGAATCACTCTCGATATATAATAGCTGCCATAAGTTGATG AACTTTTTTGGCTATAGTCG
Downstream 100 bases:
>100_bases CTAAATATTCATTTGTTATCCTGACATGTTCTTCCCCATGGCATGGGCGAGGTGGCGCCTCACGTGTCATATCTTCTTAT ATAGATTTTTATACTCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYFDYIFFSPCEGVYAAFNAAIK KSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHILMMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISA NAYSINGLYSLDYKVVSDYYWLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL IFRLTRCLVSSFFAK
Sequences:
>Translated_255_residues MTATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYFDYIFFSPCEGVYAAFNAAIK KSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHILMMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISA NAYSINGLYSLDYKVVSDYYWLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL IFRLTRCLVSSFFAK >Mature_254_residues TATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYFDYIFFSPCEGVYAAFNAAIKK SLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHILMMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISAN AYSINGLYSLDYKVVSDYYWLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFALI FRLTRCLVSSFFAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28577; Mature: 28446
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYF CCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH DYIFFSPCEGVYAAFNAAIKKSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHIL HEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCCHHHH MMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISANAYSINGLYSLDYKVVSDYY HHHHHHCCHHHEEEHHHHCCCCCHHHCCEECCCCHHHEECCCEEECCEEEECHHHHHHHH WLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL HHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH IFRLTRCLVSSFFAK HHHHHHHHHHHHHCC >Mature Secondary Structure TATLFLCCPSLSFSGSTARTANSFNRLKNLLSVFDISVKTLFLSSDQNDLASAEAHSYF CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHH DYIFFSPCEGVYAAFNAAIKKSLSLSADWIWLLGEGDTILCERLDLSILSQNLSLGSHIL HEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHCCCCCHHHH MMNMFVGDRKLRCKLKEAFPSPLFSLDTMRFNHPASIISANAYSINGLYSLDYKVVSDYY HHHHHHCCHHHEEEHHHHCCCCCHHHCCEECCCCHHHEECCCEEECCEEEECHHHHHHHH WLHKACAANLSITHLPFVSVYHELGGISTSSGKSRFFEHYQCLLALNRVYGFSFSVFFAL HHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH IFRLTRCLVSSFFAK HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA