Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241299

Identifier: 148241299

GI number: 148241299

Start: 202620

End: 203888

Strand: Direct

Name: 148241299

Synonym: SynRCC307_0200

Alternate gene names: NA

Gene position: 202620-203888 (Clockwise)

Preceding gene: 148241298

Following gene: 148241300

Centisome position: 9.11

GC content: 35.7

Gene sequence:

>1269_bases
ATGTTAGTTCTATTTACTTTGTGCCTGTTTCAAGCTACTAGGTGGTTTGGCATTGAGAGAAGTATATTCTACATTTTAAC
ATGCATTCTTTTAGCACTTTTGATCGGCTTAATAGGTAAATATTCCATCACCAAACAGTCTACCCTGGCATTCTTATTAA
TTGCAACCTTTTCTTTGCCTGCAATTATTAATTTTGCTCTTATACCAACTGTAAGTCTTTCACAGGCCCTTTTACCCTTT
GTCGGCTTTCTTAAAGTCTTTCTACTTCTTCTTCTTCTTTCTAGCTTGCCTTTAACTACATCAATAAATTTTATCCACAG
ATTCATGCTATTCGCAACCTCATATGGATTTTTGCAGTGGATTATTTCATCACTTGGTTTCGCACAAAGGGCGAGTTTGA
TCGATTCGCATTATGAAATAGTTGGGTTTTTCCCTATCTGGCGAGTGAATTCACTGTGGGGTGAAAGTCAGCATTTTTCC
CAAGTACTCGTCTTTTATCTTTTATTTTGCTTCGTCGAGAGTTCTCTTTTAAACCCCACCGAAAATATATCAAGAAAATT
TGGCATTTATCTCTCCCTTTTTATGTTGGCAACAAGTGGCAGTACAACAGGTTATTTCTTAAGTCTTTTTGTCATTACTT
CTCATCTTATCTTGTCTTTGACTAAACCTTTTTTGAGCAACTTACCCTTAAGTTACTCTTCACTCCACTCCCCACTGACA
TCATTAAAAAAGATTTTCCATTTCATCCTTCGAAAGCAATATTTCTTTTTGTTATTGACAGTTTTTTTTGCTTTTACTGT
ATTTGTGTCCACTTCTGATGCTCTTCTTCGTCAGTTTGCAAAGCAATCTAGTAGAGCGAGTCTAGTTGCTTCTTTTATAT
TGGATACAAATAATCTATCAACTGGTTCTAGTGGCTGGGACTCTGGTACTCGTGCTCAATCTTTAATTCGCGCCAAAGAT
TATTTATCGAATCCTTCTAAGCTTCCACAATATTCTCCTGAGCTTGCCACAAAATCCAAAGATGGGTTTTTACTTAACTT
TGTCAGGTTTGGATTTATTGGTTCTTTCATGGTTACTATCTCACTTTTAATAGTATGTTATATATATAATTTTGACCCTT
TAATGTCGTTGGGATTCCTCGCTTTAGTCTTAATATTTTGGTTTCGCGGTGAAACAATTAATGCTACATCTTTTCAATTT
GGCTTGGTTCTCTCTCTTTTCATGCTCTCATTCAAATATGGCAATTCTCGTGTTCCAGCTAGAAACTAA

Upstream 100 bases:

>100_bases
AGTCGCCAGTGAATACTCCTTACACGTCTGACATAGGCAATATAGGGGACTTTTGCCCAGAAGATATGCTTTTTGATCCT
TCTCCCTATTATATTTAAAT

Downstream 100 bases:

>100_bases
TTTATGACCGTTTCATTAATCACTGGCTGTCATCGTTCTGGGTCCACATGGCTTGGTAAAACTATTTGTTATGCTTCAAA
CTCTATCTACTTTTGGGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MLVLFTLCLFQATRWFGIERSIFYILTCILLALLIGLIGKYSITKQSTLAFLLIATFSLPAIINFALIPTVSLSQALLPF
VGFLKVFLLLLLLSSLPLTTSINFIHRFMLFATSYGFLQWIISSLGFAQRASLIDSHYEIVGFFPIWRVNSLWGESQHFS
QVLVFYLLFCFVESSLLNPTENISRKFGIYLSLFMLATSGSTTGYFLSLFVITSHLILSLTKPFLSNLPLSYSSLHSPLT
SLKKIFHFILRKQYFFLLLTVFFAFTVFVSTSDALLRQFAKQSSRASLVASFILDTNNLSTGSSGWDSGTRAQSLIRAKD
YLSNPSKLPQYSPELATKSKDGFLLNFVRFGFIGSFMVTISLLIVCYIYNFDPLMSLGFLALVLIFWFRGETINATSFQF
GLVLSLFMLSFKYGNSRVPARN

Sequences:

>Translated_422_residues
MLVLFTLCLFQATRWFGIERSIFYILTCILLALLIGLIGKYSITKQSTLAFLLIATFSLPAIINFALIPTVSLSQALLPF
VGFLKVFLLLLLLSSLPLTTSINFIHRFMLFATSYGFLQWIISSLGFAQRASLIDSHYEIVGFFPIWRVNSLWGESQHFS
QVLVFYLLFCFVESSLLNPTENISRKFGIYLSLFMLATSGSTTGYFLSLFVITSHLILSLTKPFLSNLPLSYSSLHSPLT
SLKKIFHFILRKQYFFLLLTVFFAFTVFVSTSDALLRQFAKQSSRASLVASFILDTNNLSTGSSGWDSGTRAQSLIRAKD
YLSNPSKLPQYSPELATKSKDGFLLNFVRFGFIGSFMVTISLLIVCYIYNFDPLMSLGFLALVLIFWFRGETINATSFQF
GLVLSLFMLSFKYGNSRVPARN
>Mature_422_residues
MLVLFTLCLFQATRWFGIERSIFYILTCILLALLIGLIGKYSITKQSTLAFLLIATFSLPAIINFALIPTVSLSQALLPF
VGFLKVFLLLLLLSSLPLTTSINFIHRFMLFATSYGFLQWIISSLGFAQRASLIDSHYEIVGFFPIWRVNSLWGESQHFS
QVLVFYLLFCFVESSLLNPTENISRKFGIYLSLFMLATSGSTTGYFLSLFVITSHLILSLTKPFLSNLPLSYSSLHSPLT
SLKKIFHFILRKQYFFLLLTVFFAFTVFVSTSDALLRQFAKQSSRASLVASFILDTNNLSTGSSGWDSGTRAQSLIRAKD
YLSNPSKLPQYSPELATKSKDGFLLNFVRFGFIGSFMVTISLLIVCYIYNFDPLMSLGFLALVLIFWFRGETINATSFQF
GLVLSLFMLSFKYGNSRVPARN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47635; Mature: 47635

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLFTLCLFQATRWFGIERSIFYILTCILLALLIGLIGKYSITKQSTLAFLLIATFSLP
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AIINFALIPTVSLSQALLPFVGFLKVFLLLLLLSSLPLTTSINFIHRFMLFATSYGFLQW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IISSLGFAQRASLIDSHYEIVGFFPIWRVNSLWGESQHFSQVLVFYLLFCFVESSLLNPT
HHHHHCHHHHHHHHHCCHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ENISRKFGIYLSLFMLATSGSTTGYFLSLFVITSHLILSLTKPFLSNLPLSYSSLHSPLT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLKKIFHFILRKQYFFLLLTVFFAFTVFVSTSDALLRQFAKQSSRASLVASFILDTNNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TGSSGWDSGTRAQSLIRAKDYLSNPSKLPQYSPELATKSKDGFLLNFVRFGFIGSFMVTI
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLLIVCYIYNFDPLMSLGFLALVLIFWFRGETINATSFQFGLVLSLFMLSFKYGNSRVPA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
RN
CC
>Mature Secondary Structure
MLVLFTLCLFQATRWFGIERSIFYILTCILLALLIGLIGKYSITKQSTLAFLLIATFSLP
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
AIINFALIPTVSLSQALLPFVGFLKVFLLLLLLSSLPLTTSINFIHRFMLFATSYGFLQW
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
IISSLGFAQRASLIDSHYEIVGFFPIWRVNSLWGESQHFSQVLVFYLLFCFVESSLLNPT
HHHHHCHHHHHHHHHCCHHHHEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ENISRKFGIYLSLFMLATSGSTTGYFLSLFVITSHLILSLTKPFLSNLPLSYSSLHSPLT
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
SLKKIFHFILRKQYFFLLLTVFFAFTVFVSTSDALLRQFAKQSSRASLVASFILDTNNLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TGSSGWDSGTRAQSLIRAKDYLSNPSKLPQYSPELATKSKDGFLLNFVRFGFIGSFMVTI
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHH
SLLIVCYIYNFDPLMSLGFLALVLIFWFRGETINATSFQFGLVLSLFMLSFKYGNSRVPA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
RN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA