Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is fabF [H]

Identifier: 148241293

GI number: 148241293

Start: 196145

End: 197101

Strand: Direct

Name: fabF [H]

Synonym: SynRCC307_0194

Alternate gene names: 148241293

Gene position: 196145-197101 (Clockwise)

Preceding gene: 148241292

Following gene: 148241294

Centisome position: 8.82

GC content: 35.63

Gene sequence:

>957_bases
ATGTTTATTACGGACATCCACTCTTTTATCCCTGGCAATCAAATTGACAATGTTCAATTAGCCAGTACTTACGGAAAATC
AGAAGATTTTGTTCTTTCAAAAATTGGAGCTTTGCGATTGCCTCGCAAGATGCCAAATCAAACTTCTTTATTCTTTGCTA
TAGAGGCAGCACAAAAACTTTTCAAATGCAATTCTTCTATCAAGCCTGAGAATATTGACTGTATTTTAGTTGTTACTCAA
AACCCTGGGAATGGAGGCGTTCCTCATATTTCTCCTCAAATCCAATCAGCACTAAGTATTAGTAATAAATGCCATACCTT
TGATATCAGCCTTGCTTGTTCAGGATATCCCTATGCTCTTAGTATAATTTCCAGTTATATGGCGGCTAACAATCTTTGCA
ATGGCTTGTTAATTACATCGGACCAATATTCCGATATCTTAGATTCTGATGACAAAAATACTTCATTGCTGTTTGGTGAT
GCATCTGCTGTGACTTTAGTCCAGTCTGAGCCAACAAGTTATTATTCACTCAAGATTAATGATATTTCGGCTTATACCGA
CGGGAACTCACATGACGCAATAGAAATGAGGAACGGCTTATTGTATATGAATGGTAGAAATGTGTTTAACTTTGCCCTTC
AGACTGTTCCTCTAGCCATAAAGAATCATTTGGCAGATCGGGATTTATCGCTTTTAGATATTGATTATGTCATTTGTCAT
CAAGGAAGTAAAGCTATTGTTGAATCAATAAGAAAAAAACTTGAACTATCTGTGGATAAGGTGCCAATTTGCATTGAACA
AATTGGCAATACTGTATCATCGTCAATACCGTTAGTTCTTAAAGATAAATTTTTCACGCCCACTCGTGAGAAGAATTGCA
ACAGAATTCTTATTTGTGGATTTGGTGTTGGGCTATCAATAGCTACAATGATATTAACAAAAATTTCAAAATGTTAG

Upstream 100 bases:

>100_bases
GTATTGGCAAAAAGATTTGTCAAATCTGAAATTATTTTGAATGACATAAAATATGGAACCATAGAGTTTATCGCTTATTA
ATTTCCGACTCTTTGACATA

Downstream 100 bases:

>100_bases
ATTCACAACTGTTAGATTGTTTGCGCAATTCCGGTTATGACGAAATTGTTGATATCGATTTTTCAAAAAGTTTCTCTGAT
AATGGTTTAGATAGCCTTGA

Product: 3-oxoacyl-[acyl-carrier-protein] synthase III

Products: NA

Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III protein 2; Beta-ketoacyl-ACP synthase III 2; KAS III 2 [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MFITDIHSFIPGNQIDNVQLASTYGKSEDFVLSKIGALRLPRKMPNQTSLFFAIEAAQKLFKCNSSIKPENIDCILVVTQ
NPGNGGVPHISPQIQSALSISNKCHTFDISLACSGYPYALSIISSYMAANNLCNGLLITSDQYSDILDSDDKNTSLLFGD
ASAVTLVQSEPTSYYSLKINDISAYTDGNSHDAIEMRNGLLYMNGRNVFNFALQTVPLAIKNHLADRDLSLLDIDYVICH
QGSKAIVESIRKKLELSVDKVPICIEQIGNTVSSSIPLVLKDKFFTPTREKNCNRILICGFGVGLSIATMILTKISKC

Sequences:

>Translated_318_residues
MFITDIHSFIPGNQIDNVQLASTYGKSEDFVLSKIGALRLPRKMPNQTSLFFAIEAAQKLFKCNSSIKPENIDCILVVTQ
NPGNGGVPHISPQIQSALSISNKCHTFDISLACSGYPYALSIISSYMAANNLCNGLLITSDQYSDILDSDDKNTSLLFGD
ASAVTLVQSEPTSYYSLKINDISAYTDGNSHDAIEMRNGLLYMNGRNVFNFALQTVPLAIKNHLADRDLSLLDIDYVICH
QGSKAIVESIRKKLELSVDKVPICIEQIGNTVSSSIPLVLKDKFFTPTREKNCNRILICGFGVGLSIATMILTKISKC
>Mature_318_residues
MFITDIHSFIPGNQIDNVQLASTYGKSEDFVLSKIGALRLPRKMPNQTSLFFAIEAAQKLFKCNSSIKPENIDCILVVTQ
NPGNGGVPHISPQIQSALSISNKCHTFDISLACSGYPYALSIISSYMAANNLCNGLLITSDQYSDILDSDDKNTSLLFGD
ASAVTLVQSEPTSYYSLKINDISAYTDGNSHDAIEMRNGLLYMNGRNVFNFALQTVPLAIKNHLADRDLSLLDIDYVICH
QGSKAIVESIRKKLELSVDKVPICIEQIGNTVSSSIPLVLKDKFFTPTREKNCNRILICGFGVGLSIATMILTKISKC

Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the

COG id: COG0332

COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fabH family [H]

Homologues:

Organism=Escherichia coli, GI1787333, Length=310, Percent_Identity=27.4193548387097, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013751
- InterPro:   IPR013747
- InterPro:   IPR004655
- InterPro:   IPR016039
- InterPro:   IPR016038 [H]

Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]

EC number: =2.3.1.180 [H]

Molecular weight: Translated: 34817; Mature: 34817

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFITDIHSFIPGNQIDNVQLASTYGKSEDFVLSKIGALRLPRKMPNQTSLFFAIEAAQKL
CEECCHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH
FKCNSSIKPENIDCILVVTQNPGNGGVPHISPQIQSALSISNKCHTFDISLACSGYPYAL
HHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCHHH
SIISSYMAANNLCNGLLITSDQYSDILDSDDKNTSLLFGDASAVTLVQSEPTSYYSLKIN
HHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEE
DISAYTDGNSHDAIEMRNGLLYMNGRNVFNFALQTVPLAIKNHLADRDLSLLDIDYVICH
EEEEECCCCCCCEEEECCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE
QGSKAIVESIRKKLELSVDKVPICIEQIGNTVSSSIPLVLKDKFFTPTREKNCNRILICG
CCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCEEEEEE
FGVGLSIATMILTKISKC
CCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFITDIHSFIPGNQIDNVQLASTYGKSEDFVLSKIGALRLPRKMPNQTSLFFAIEAAQKL
CEECCHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHH
FKCNSSIKPENIDCILVVTQNPGNGGVPHISPQIQSALSISNKCHTFDISLACSGYPYAL
HHCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCHHH
SIISSYMAANNLCNGLLITSDQYSDILDSDDKNTSLLFGDASAVTLVQSEPTSYYSLKIN
HHHHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCEEEEECCCEEEEEECCCCEEEEEEEE
DISAYTDGNSHDAIEMRNGLLYMNGRNVFNFALQTVPLAIKNHLADRDLSLLDIDYVICH
EEEEECCCCCCCEEEECCCEEEECCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEEEEEE
QGSKAIVESIRKKLELSVDKVPICIEQIGNTVSSSIPLVLKDKFFTPTREKNCNRILICG
CCCHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCCEEEECCCCCCCCCCCCCEEEEEE
FGVGLSIATMILTKISKC
CCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12566566 [H]