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The map label for this gene is yfbE [C]

Identifier: 148241292

GI number: 148241292

Start: 194347

End: 195456

Strand: Direct

Name: yfbE [C]

Synonym: SynRCC307_0193

Alternate gene names: 148241292

Gene position: 194347-195456 (Clockwise)

Preceding gene: 148241291

Following gene: 148241293

Centisome position: 8.74

GC content: 43.15

Gene sequence:

>1110_bases
ATGAGCAACTTAGATCCTATCTACGTCACTAAGCCTCATCTGCCACCACTAGAGGACTTCATTCCACTCTTGCAGCAGAT
CTGGGAGAGACGTATTTTAACTAACAATGGACCCTTTCATCAAGAGCTCGAGGATGCTTTGTGCAAGTACCTAGGTGTCA
AGCATTTATCCCTTTTTTCTAATGGCACAATCGCCCTTGTTACTGCTTTAAAAGCGCTAGGTGTAAGCGGAGAGGTCATC
ACCACCCCATACTCTTTTGTCGCTACCGCTCATTCCTTGCTCTGGAATAACATAACACCTGTTTTTGTAGACATTGATCC
AGTTACATTTAACCTTGATCCTTCAAAGATTGAGGCGGCAATTACTGACAAAACAACTGCAATTCTCCCGGTCCATTGTT
ATGGATTTCCGTGTGATGTTGATGCGATTCAAGAGATAGCAGACAGAAATGGTCTAAAGGTTATCTATGATGCTGCGCAT
GCTTTTGGTGTAAACTGTCACTGTGGAAGTGTTTTAAATCATGGGGACCTATCTATACTGAGCTTTCATGCGACAAAGGT
TTTTAATACTTTTGAAGGAGGAGCTATTATATGCCATGACAAAGATACAAAACAAAAAATTGATAAACTAAAAAACTTTG
GGTTCGTGGGCGAAACCGAGGTAGAGGCTACCGGCATCAACGGCAAAATGAATGAATTGCAGGCAGCGATTGGGCTTTTG
CAACTACAATCAATAGATGTCGCTATAGATCAGCGCTCTGTTATTTCTTCCACCTATCGCGAACAGATTGAGAAGATTGA
GGGGCTGAGCTGTCCTCCGCCCTCATCTGCTCTCCATTACAACGAAGCATACTTCCCGATCTTGGTAAAGCCAGAATATC
GTCTTTCCAGAGATGGCCTCTACGAGAAGCTAAGGCAGGCCAACATCTATGCCCGCCGTTATTTCTACCCTTTAATAACT
GATTTTTCGATGTATCGGCATCTTTTTTCATCATCGCCTGAAAAGTTGCCGATAGCTAATCTTGTCGCGAGCCAGGTGAT
TTGCCTCCCTATTTATTCAACCCTTAGTACGGAAGATTTGGATCGAGTCCTGGCAATACTTGCTTATTAA

Upstream 100 bases:

>100_bases
ATCTGCTCTTTCCAAATTCTGATTAAATGCCTCCTCTTTTGGGAGGCAATTTCGCTAACATAACTTGTCTGCCCTATTAT
GATCGTCCCTTAGGCATGCT

Downstream 100 bases:

>100_bases
TGCCTGACACTATTCTTTACTTAGAACTCTTCCACATTGTCTTCCGATCATCCTTAAATGATTTCTACTTTTACGACAGA
TTTGCCTTTTAAAGGCAATC

Product: cell wall biogenesis regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSNLDPIYVTKPHLPPLEDFIPLLQQIWERRILTNNGPFHQELEDALCKYLGVKHLSLFSNGTIALVTALKALGVSGEVI
TTPYSFVATAHSLLWNNITPVFVDIDPVTFNLDPSKIEAAITDKTTAILPVHCYGFPCDVDAIQEIADRNGLKVIYDAAH
AFGVNCHCGSVLNHGDLSILSFHATKVFNTFEGGAIICHDKDTKQKIDKLKNFGFVGETEVEATGINGKMNELQAAIGLL
QLQSIDVAIDQRSVISSTYREQIEKIEGLSCPPPSSALHYNEAYFPILVKPEYRLSRDGLYEKLRQANIYARRYFYPLIT
DFSMYRHLFSSSPEKLPIANLVASQVICLPIYSTLSTEDLDRVLAILAY

Sequences:

>Translated_369_residues
MSNLDPIYVTKPHLPPLEDFIPLLQQIWERRILTNNGPFHQELEDALCKYLGVKHLSLFSNGTIALVTALKALGVSGEVI
TTPYSFVATAHSLLWNNITPVFVDIDPVTFNLDPSKIEAAITDKTTAILPVHCYGFPCDVDAIQEIADRNGLKVIYDAAH
AFGVNCHCGSVLNHGDLSILSFHATKVFNTFEGGAIICHDKDTKQKIDKLKNFGFVGETEVEATGINGKMNELQAAIGLL
QLQSIDVAIDQRSVISSTYREQIEKIEGLSCPPPSSALHYNEAYFPILVKPEYRLSRDGLYEKLRQANIYARRYFYPLIT
DFSMYRHLFSSSPEKLPIANLVASQVICLPIYSTLSTEDLDRVLAILAY
>Mature_368_residues
SNLDPIYVTKPHLPPLEDFIPLLQQIWERRILTNNGPFHQELEDALCKYLGVKHLSLFSNGTIALVTALKALGVSGEVIT
TPYSFVATAHSLLWNNITPVFVDIDPVTFNLDPSKIEAAITDKTTAILPVHCYGFPCDVDAIQEIADRNGLKVIYDAAHA
FGVNCHCGSVLNHGDLSILSFHATKVFNTFEGGAIICHDKDTKQKIDKLKNFGFVGETEVEATGINGKMNELQAAIGLLQ
LQSIDVAIDQRSVISSTYREQIEKIEGLSCPPPSSALHYNEAYFPILVKPEYRLSRDGLYEKLRQANIYARRYFYPLITD
FSMYRHLFSSSPEKLPIANLVASQVICLPIYSTLSTEDLDRVLAILAY

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=351, Percent_Identity=31.6239316239316, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI2367285, Length=302, Percent_Identity=30.1324503311258, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 41094; Mature: 40962

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLDPIYVTKPHLPPLEDFIPLLQQIWERRILTNNGPFHQELEDALCKYLGVKHLSLFS
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHC
NGTIALVTALKALGVSGEVITTPYSFVATAHSLLWNNITPVFVDIDPVTFNLDPSKIEAA
CCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHEEE
ITDKTTAILPVHCYGFPCDVDAIQEIADRNGLKVIYDAAHAFGVNCHCGSVLNHGDLSIL
ECCCCEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCCEEEE
SFHATKVFNTFEGGAIICHDKDTKQKIDKLKNFGFVGETEVEATGINGKMNELQAAIGLL
EEHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
QLQSIDVAIDQRSVISSTYREQIEKIEGLSCPPPSSALHYNEAYFPILVKPEYRLSRDGL
HHEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHH
YEKLRQANIYARRYFYPLITDFSMYRHLFSSSPEKLPIANLVASQVICLPIYSTLSTEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEHHHHHCCHHHH
DRVLAILAY
HHHHHHHCC
>Mature Secondary Structure 
SNLDPIYVTKPHLPPLEDFIPLLQQIWERRILTNNGPFHQELEDALCKYLGVKHLSLFS
CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHC
NGTIALVTALKALGVSGEVITTPYSFVATAHSLLWNNITPVFVDIDPVTFNLDPSKIEAA
CCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCCEEEEEECCEEEECCHHHHEEE
ITDKTTAILPVHCYGFPCDVDAIQEIADRNGLKVIYDAAHAFGVNCHCGSVLNHGDLSIL
ECCCCEEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCCCCCCCEEEE
SFHATKVFNTFEGGAIICHDKDTKQKIDKLKNFGFVGETEVEATGINGKMNELQAAIGLL
EEHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHH
QLQSIDVAIDQRSVISSTYREQIEKIEGLSCPPPSSALHYNEAYFPILVKPEYRLSRDGL
HHEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHH
YEKLRQANIYARRYFYPLITDFSMYRHLFSSSPEKLPIANLVASQVICLPIYSTLSTEDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEHHHHHCCHHHH
DRVLAILAY
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]