Definition Synechococcus sp. RCC307, complete genome.
Accession NC_009482
Length 2,224,914

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The map label for this gene is 148241210

Identifier: 148241210

GI number: 148241210

Start: 107994

End: 108518

Strand: Direct

Name: 148241210

Synonym: SynRCC307_0111

Alternate gene names: NA

Gene position: 107994-108518 (Clockwise)

Preceding gene: 148241209

Following gene: 148241211

Centisome position: 4.85

GC content: 65.52

Gene sequence:

>525_bases
TTGGGTGCGGGTGCGCTGATGGCTGATCGCTCCTGGTGGCGGCTTCAGGCGTTGATCCTCACCAGCCTGCTGTTGCTGCT
GCTAACGATCGCCACCCCGGCTTGGTTGCGGCTCGATGGCATGCCTCCCAGTTGGCCGGTGCTTTGGCTGCTGCCGTGGG
CGGTGGTGGAAGGCCCGATCGCTGGAGCACTGGCGGCGGTGTTGGTGGGCCTTGGCTTTGATTCGTTCTATGGCCAGGGC
ATCAGCTCGATCCCCGTGCTCGTGTTGTTGGCCCTGTGGTGGGGCCAGTTCCGCGATGCGCGCCGGCCTTTGGAGCGCAG
CACCACGCTTGGATTGCAGGCCTTGCTTGGAAGCTTGCTGCTGAGTGCCAGCTTTGCGCTGCAGCTGCACTGGCGCGGTG
GATCGGTGGCTTTGGCGTGGCAGGTGAGCCTGGCGCAGGCGCTGCTCACGGCCCTGTTGGCGCCGGTGGTTTGCTCTGTG
CAGGTGCTGCTTTGGAGGCGCCTCACCCCAGACGATGGCCGTTAA

Upstream 100 bases:

>100_bases
CTGCCAACTTGATCATTGGCGTTGTGCAAAGCGTCAACACCCAAGCCGGACCAGCTCCTCAGGGCTTGGTGCAGCTCTCA
GCTCCAGCCGATCAGATCGA

Downstream 100 bases:

>100_bases
AAAAAGGCTGCTGTTGCTGGGTTTGCTTGTAGCTCTATTGGGGGGCTGCAGCCCGGGGCCCAAGCCCAATGAATTGCAGT
TCTGGACGATTCAGCTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MGAGALMADRSWWRLQALILTSLLLLLLTIATPAWLRLDGMPPSWPVLWLLPWAVVEGPIAGALAAVLVGLGFDSFYGQG
ISSIPVLVLLALWWGQFRDARRPLERSTTLGLQALLGSLLLSASFALQLHWRGGSVALAWQVSLAQALLTALLAPVVCSV
QVLLWRRLTPDDGR

Sequences:

>Translated_174_residues
MGAGALMADRSWWRLQALILTSLLLLLLTIATPAWLRLDGMPPSWPVLWLLPWAVVEGPIAGALAAVLVGLGFDSFYGQG
ISSIPVLVLLALWWGQFRDARRPLERSTTLGLQALLGSLLLSASFALQLHWRGGSVALAWQVSLAQALLTALLAPVVCSV
QVLLWRRLTPDDGR
>Mature_173_residues
GAGALMADRSWWRLQALILTSLLLLLLTIATPAWLRLDGMPPSWPVLWLLPWAVVEGPIAGALAAVLVGLGFDSFYGQGI
SSIPVLVLLALWWGQFRDARRPLERSTTLGLQALLGSLLLSASFALQLHWRGGSVALAWQVSLAQALLTALLAPVVCSVQ
VLLWRRLTPDDGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18869; Mature: 18737

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGALMADRSWWRLQALILTSLLLLLLTIATPAWLRLDGMPPSWPVLWLLPWAVVEGPI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCH
AGALAAVLVGLGFDSFYGQGISSIPVLVLLALWWGQFRDARRPLERSTTLGLQALLGSLL
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LSASFALQLHWRGGSVALAWQVSLAQALLTALLAPVVCSVQVLLWRRLTPDDGR
HHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GAGALMADRSWWRLQALILTSLLLLLLTIATPAWLRLDGMPPSWPVLWLLPWAVVEGPI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHCCCH
AGALAAVLVGLGFDSFYGQGISSIPVLVLLALWWGQFRDARRPLERSTTLGLQALLGSLL
HHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
LSASFALQLHWRGGSVALAWQVSLAQALLTALLAPVVCSVQVLLWRRLTPDDGR
HHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA