| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is mshA [H]
Identifier: 148241200
GI number: 148241200
Start: 98871
End: 100190
Strand: Direct
Name: mshA [H]
Synonym: SynRCC307_0101
Alternate gene names: 148241200
Gene position: 98871-100190 (Clockwise)
Preceding gene: 148241199
Following gene: 148241201
Centisome position: 4.44
GC content: 41.44
Gene sequence:
>1320_bases ATGGCATTACGTGTTACTCATCTTTCTGAATCAGATTTAAGCGGAGGTGCAGCGAGAGCTGCTTATCGCATTCATCGGTC TCTTAGTCGGTATATATCTCCAGATATTCTTCAAACTACAATGCTAGTAAAAAATAGGATATCTGATGATTTAGATATCA GGGCTTCGCGGCATGGTGGTCATCCAGTCAAGAACTTGTTTGATACTATTTTGGGTAAATGGGCTTATCGTAGGTTTTCT ACTTCAAATCATGGCTTGTATTCGGTGGCATGGCCGGAGACTGGATTAGGTAAAGAGATTGCTTCGCAGATTCACGATAA TGAAATTGATATCATTCATCTTCACTGGATCCACAATCACCTAATTTCTATTGAAGAAATCGGCAGTGTTGCTTGCCCTA TTGTTTGGACTTTGCATGATCAATGGCCAATTTGTGGTGCCGAACACTATGCAGAATTTGTAGAAGAATGCCAGCAAGAA GGCACTTTTACTCATCTCCCACGATATTCTTGCGGATATTCAGAAAAATCTAAGCTGTATCATGAGCCTCGAAGAGATCT AAACCGTATTACTTGGCTACGCAAGAAAAAATCATGGGATAAAAAAATGTTTTTAGTCTGTCCAAGCCAATGGATGGCCA AGTGTGTAAGAAGTAGTGCATTAATGGCGGATTGGCCTTTGGCAGTAATTCCTAACCCAATTGACTTGAAGAGATGGAAG CCTATTGATCCTCAGATTGCCCGCAACCTCTTAGGCTTGCCTGCCAACAAACATTTGCTTTGCTTTGGAGCGATCAGCGG CTTAAATGATCCTCGTAAAGGAAATGACCTACTTCTGAAGTCTTTATTTTATTTAAAAGATATTGCTATCAATGACAGTA TCGAGGTCGTGATATTTGGTCAATCTGAATATTCATCGTGTCCCTCTATTCCTTTCCCTGTGCATTTCATGGGCCAACTT AATGATGATATAACACTAGCGCTGACTTATTCTTCCTGTGATCTAATGATGGTTCCATCTCGTCAAGACAATCTGCCGAG CACTGCAACTGAAGCTCATGCTTGTGGAATACCTGTTGTCGCTTATGCAGTAGGAGGGATTCCTGATATTGTGGACAATA ATATCACTGGACTTCTGGTTGAGCCTGGAAATTACATCAAATTTGCTGAGGCTGTATTAGAGCTTGTACTTGATAACTCT AAGCGTATGGAGATGGGCAAAGCTGCTAGGATCCGCGCTTCATTGCTATGGGATCAGGAATTAATAGCTGATCAATATGC CAAGCTGTATCAGATGCTCTCTCGGCAGCCAACTACTTAA
Upstream 100 bases:
>100_bases AACTGTTATGCTCGTGGAAAGCAAAATCATTGATTGCCAAAGTTTTTTGGCTTTTATCTTTGACTTATACCAGCAGACTC TTTTTATTTTGATCTAGCAA
Downstream 100 bases:
>100_bases TTTATATGCCTTACCTGATTAATCAAAAGCTTTTTTTTGTTCATATTCCAAAAACAGCGGGCTCATCAATTGAGAGAGCC TTTGGTGTTCACCCGTCGTG
Product: glysosyltransferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MALRVTHLSESDLSGGAARAAYRIHRSLSRYISPDILQTTMLVKNRISDDLDIRASRHGGHPVKNLFDTILGKWAYRRFS TSNHGLYSVAWPETGLGKEIASQIHDNEIDIIHLHWIHNHLISIEEIGSVACPIVWTLHDQWPICGAEHYAEFVEECQQE GTFTHLPRYSCGYSEKSKLYHEPRRDLNRITWLRKKKSWDKKMFLVCPSQWMAKCVRSSALMADWPLAVIPNPIDLKRWK PIDPQIARNLLGLPANKHLLCFGAISGLNDPRKGNDLLLKSLFYLKDIAINDSIEVVIFGQSEYSSCPSIPFPVHFMGQL NDDITLALTYSSCDLMMVPSRQDNLPSTATEAHACGIPVVAYAVGGIPDIVDNNITGLLVEPGNYIKFAEAVLELVLDNS KRMEMGKAARIRASLLWDQELIADQYAKLYQMLSRQPTT
Sequences:
>Translated_439_residues MALRVTHLSESDLSGGAARAAYRIHRSLSRYISPDILQTTMLVKNRISDDLDIRASRHGGHPVKNLFDTILGKWAYRRFS TSNHGLYSVAWPETGLGKEIASQIHDNEIDIIHLHWIHNHLISIEEIGSVACPIVWTLHDQWPICGAEHYAEFVEECQQE GTFTHLPRYSCGYSEKSKLYHEPRRDLNRITWLRKKKSWDKKMFLVCPSQWMAKCVRSSALMADWPLAVIPNPIDLKRWK PIDPQIARNLLGLPANKHLLCFGAISGLNDPRKGNDLLLKSLFYLKDIAINDSIEVVIFGQSEYSSCPSIPFPVHFMGQL NDDITLALTYSSCDLMMVPSRQDNLPSTATEAHACGIPVVAYAVGGIPDIVDNNITGLLVEPGNYIKFAEAVLELVLDNS KRMEMGKAARIRASLLWDQELIADQYAKLYQMLSRQPTT >Mature_438_residues ALRVTHLSESDLSGGAARAAYRIHRSLSRYISPDILQTTMLVKNRISDDLDIRASRHGGHPVKNLFDTILGKWAYRRFST SNHGLYSVAWPETGLGKEIASQIHDNEIDIIHLHWIHNHLISIEEIGSVACPIVWTLHDQWPICGAEHYAEFVEECQQEG TFTHLPRYSCGYSEKSKLYHEPRRDLNRITWLRKKKSWDKKMFLVCPSQWMAKCVRSSALMADWPLAVIPNPIDLKRWKP IDPQIARNLLGLPANKHLLCFGAISGLNDPRKGNDLLLKSLFYLKDIAINDSIEVVIFGQSEYSSCPSIPFPVHFMGQLN DDITLALTYSSCDLMMVPSRQDNLPSTATEAHACGIPVVAYAVGGIPDIVDNNITGLLVEPGNYIKFAEAVLELVLDNSK RMEMGKAARIRASLLWDQELIADQYAKLYQMLSRQPTT
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 49574; Mature: 49442
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRVTHLSESDLSGGAARAAYRIHRSLSRYISPDILQTTMLVKNRISDDLDIRASRHGG CEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCC HPVKNLFDTILGKWAYRRFSTSNHGLYSVAWPETGLGKEIASQIHDNEIDIIHLHWIHNH CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEEHHHH LISIEEIGSVACPIVWTLHDQWPICGAEHYAEFVEECQQEGTFTHLPRYSCGYSEKSKLY HCCHHHHCCEECCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHH HEPRRDLNRITWLRKKKSWDKKMFLVCPSQWMAKCVRSSALMADWPLAVIPNPIDLKRWK HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEECCCCEECCCCCCCCCCC PIDPQIARNLLGLPANKHLLCFGAISGLNDPRKGNDLLLKSLFYLKDIAINDSIEVVIFG CCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEECCCEEEEEEC QSEYSSCPSIPFPVHFMGQLNDDITLALTYSSCDLMMVPSRQDNLPSTATEAHACGIPVV CCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHCCCHHH AYAVGGIPDIVDNNITGLLVEPGNYIKFAEAVLELVLDNSKRMEMGKAARIRASLLWDQE HHHHCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHH LIADQYAKLYQMLSRQPTT HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ALRVTHLSESDLSGGAARAAYRIHRSLSRYISPDILQTTMLVKNRISDDLDIRASRHGG EEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCCCC HPVKNLFDTILGKWAYRRFSTSNHGLYSVAWPETGLGKEIASQIHDNEIDIIHLHWIHNH CHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEEEEEEHHHH LISIEEIGSVACPIVWTLHDQWPICGAEHYAEFVEECQQEGTFTHLPRYSCGYSEKSKLY HCCHHHHCCEECCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHH HEPRRDLNRITWLRKKKSWDKKMFLVCPSQWMAKCVRSSALMADWPLAVIPNPIDLKRWK HHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCEECCCCEECCCCCCCCCCC PIDPQIARNLLGLPANKHLLCFGAISGLNDPRKGNDLLLKSLFYLKDIAINDSIEVVIFG CCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHEECCCEEEEEEC QSEYSSCPSIPFPVHFMGQLNDDITLALTYSSCDLMMVPSRQDNLPSTATEAHACGIPVV CCCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCCEEECCCCCCCCCCCHHHHHHCCCHHH AYAVGGIPDIVDNNITGLLVEPGNYIKFAEAVLELVLDNSKRMEMGKAARIRASLLWDQE HHHHCCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHH LIADQYAKLYQMLSRQPTT HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA