| Definition | Synechococcus sp. RCC307, complete genome. |
|---|---|
| Accession | NC_009482 |
| Length | 2,224,914 |
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The map label for this gene is 148241199
Identifier: 148241199
GI number: 148241199
Start: 97820
End: 98803
Strand: Direct
Name: 148241199
Synonym: SynRCC307_0100
Alternate gene names: NA
Gene position: 97820-98803 (Clockwise)
Preceding gene: 148241197
Following gene: 148241200
Centisome position: 4.4
GC content: 40.96
Gene sequence:
>984_bases ATGCAGGAGTTACCAGTTCTTCTACTCACATGGCGTCGCCCCGATGCCACACAAAAAGTTTTGGAGGTACTTCGTAAAGT TAAGCCGTTAATTCTTTATGTTGCTTCTGATGGGCCACGCCATCAATCTGATTGGGATGCAATTCGATGTACTCGAGCAA CTATAGAAAAACTGGTTGATTGGCCTTGCCTAGTCAAAAAAAGGTATTTGTCTTCAAATCTTGGGCCTGGCTTAAGTCAG TCGTCATCAATTGATTGGTTTTTTGGTGAGCAGATAAAAGGCTTAATACTGGAGGACGACTGCATCCCTCATCCTGATTT GTTTCCTTTTTGCAGTGAACTGCTAAATCGCTATGAAATGGATATGAGGGTATGGACAATTTCAGGAAGTAATCATCAGC TTGGTCGCCGCCGAGGAAATGCAAGTTATTTTTTTAGCCGCTATCATCATTCGTGGGGTTGGGCAACTTGGAGGTCAAGA TGGCAAGAGTACTCACAAGCTTCTCAAATATGGGAAACTTTAGTATCGTCAACTGACGCAGTAAATTCCTTGCTTGATAA TTTGCCTTCGGATCTTGAAGCAAAGTATTGGATGGAAAAATGGACCCCCTTGTTTGTCTTGTCTAAACCCAATTGGGATT ATAGATGGCTTTTAGTTTGCATGGCTAATAATGGTCTGACAATTATCCCCAATGAGAACTTGGTTGAAAATATTGGTTTT GGAAAGGATGCTACCCATACCACCCAACTAAAGCAGCAAGGGCAGCTTCCGGAGCGGTTTTTCTTGCGTGATCATCCAAT TTGTATATATCCGAATTCTCAGGCTGATCAATTTACTTTTGATTTTCATTACGGAGGATTGCAGTTAAAAAAAGATCGAC GATTTCATAATCAGATTTTAAGGCGTCTGCGCTTAATCGTGACCAATCCTATGCATTATATTCGGAAAATTAACTGTTAT GCTCGTGGAAAGCAAAATCATTGA
Upstream 100 bases:
>100_bases TGACAGCTATGTAGATTTGCTTTTGCCATACGAGATGGACTGCTTGAAGGTTGGATGAAAGGCGAATTTAGGTTAAACTA AAATAATAGGTGTCATATAC
Downstream 100 bases:
>100_bases TTGCCAAAGTTTTTTGGCTTTTATCTTTGACTTATACCAGCAGACTCTTTTTATTTTGATCTAGCAAATGGCATTACGTG TTACTCATCTTTCTGAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQELPVLLLTWRRPDATQKVLEVLRKVKPLILYVASDGPRHQSDWDAIRCTRATIEKLVDWPCLVKKRYLSSNLGPGLSQ SSSIDWFFGEQIKGLILEDDCIPHPDLFPFCSELLNRYEMDMRVWTISGSNHQLGRRRGNASYFFSRYHHSWGWATWRSR WQEYSQASQIWETLVSSTDAVNSLLDNLPSDLEAKYWMEKWTPLFVLSKPNWDYRWLLVCMANNGLTIIPNENLVENIGF GKDATHTTQLKQQGQLPERFFLRDHPICIYPNSQADQFTFDFHYGGLQLKKDRRFHNQILRRLRLIVTNPMHYIRKINCY ARGKQNH
Sequences:
>Translated_327_residues MQELPVLLLTWRRPDATQKVLEVLRKVKPLILYVASDGPRHQSDWDAIRCTRATIEKLVDWPCLVKKRYLSSNLGPGLSQ SSSIDWFFGEQIKGLILEDDCIPHPDLFPFCSELLNRYEMDMRVWTISGSNHQLGRRRGNASYFFSRYHHSWGWATWRSR WQEYSQASQIWETLVSSTDAVNSLLDNLPSDLEAKYWMEKWTPLFVLSKPNWDYRWLLVCMANNGLTIIPNENLVENIGF GKDATHTTQLKQQGQLPERFFLRDHPICIYPNSQADQFTFDFHYGGLQLKKDRRFHNQILRRLRLIVTNPMHYIRKINCY ARGKQNH >Mature_327_residues MQELPVLLLTWRRPDATQKVLEVLRKVKPLILYVASDGPRHQSDWDAIRCTRATIEKLVDWPCLVKKRYLSSNLGPGLSQ SSSIDWFFGEQIKGLILEDDCIPHPDLFPFCSELLNRYEMDMRVWTISGSNHQLGRRRGNASYFFSRYHHSWGWATWRSR WQEYSQASQIWETLVSSTDAVNSLLDNLPSDLEAKYWMEKWTPLFVLSKPNWDYRWLLVCMANNGLTIIPNENLVENIGF GKDATHTTQLKQQGQLPERFFLRDHPICIYPNSQADQFTFDFHYGGLQLKKDRRFHNQILRRLRLIVTNPMHYIRKINCY ARGKQNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38590; Mature: 38590
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQELPVLLLTWRRPDATQKVLEVLRKVKPLILYVASDGPRHQSDWDAIRCTRATIEKLVD CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC WPCLVKKRYLSSNLGPGLSQSSSIDWFFGEQIKGLILEDDCIPHPDLFPFCSELLNRYEM CHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC DMRVWTISGSNHQLGRRRGNASYFFSRYHHSWGWATWRSRWQEYSQASQIWETLVSSTDA CEEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH VNSLLDNLPSDLEAKYWMEKWTPLFVLSKPNWDYRWLLVCMANNGLTIIPNENLVENIGF HHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCCEEEECCCHHHHHCCC GKDATHTTQLKQQGQLPERFFLRDHPICIYPNSQADQFTFDFHYGGLQLKKDRRFHNQIL CCCCCHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCCEEEEEEECCEEECHHHHHHHHHH RRLRLIVTNPMHYIRKINCYARGKQNH HHHHHHHCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQELPVLLLTWRRPDATQKVLEVLRKVKPLILYVASDGPRHQSDWDAIRCTRATIEKLVD CCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC WPCLVKKRYLSSNLGPGLSQSSSIDWFFGEQIKGLILEDDCIPHPDLFPFCSELLNRYEM CHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHCC DMRVWTISGSNHQLGRRRGNASYFFSRYHHSWGWATWRSRWQEYSQASQIWETLVSSTDA CEEEEEEECCCCHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHH VNSLLDNLPSDLEAKYWMEKWTPLFVLSKPNWDYRWLLVCMANNGLTIIPNENLVENIGF HHHHHHHCCCHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEECCCEEEECCCHHHHHCCC GKDATHTTQLKQQGQLPERFFLRDHPICIYPNSQADQFTFDFHYGGLQLKKDRRFHNQIL CCCCCHHHHHHHCCCCCHHHHHCCCCEEEECCCCCCCEEEEEEECCEEECHHHHHHHHHH RRLRLIVTNPMHYIRKINCYARGKQNH HHHHHHHCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA