Click here to switch to the map view.

The map label for this gene is ymfP [C]

Identifier: 147675708

GI number: 147675708

Start: 719237

End: 720304

Strand: Direct

Name: ymfP [C]

Synonym: VC0395_A0696

Alternate gene names: 147675708

Gene position: 719237-720304 (Clockwise)

Preceding gene: 147673388

Following gene: 147674996

Centisome position: 23.78

GC content: 53.56

Gene sequence:

>1068_bases
GTGCCCTATAGCACTCCAACGCTACGACAACTGATTGAGACGGGTTTAATCGACATTGAAACCTCGTTAGATCAGGTGCT
GCCAAAATTCGGCGTTGAGCAAGCGCTCAACGTGGCCGTCAGTGGCGCGATTCGTGACCTCTATGATTACAATAGCTGGA
TTGTTCGCCAAATTATTCCAACGTCAGAGAGCGACGACCAAACCATTATTGATACTGCTCGCACCGAGGGTGTGATCCGC
AAACTGGCCTCTGCTTCGGCAGGGCCTGTCACTTTCACAGGCAATGCACCCATTCCGGTTTCCACTGTGATGACGCATCA
AGATGGGCGCTCATATCGAGTGACCTCATCGGCTGCGCCATCCGGTGGCTCTGTGGTGGTGCAAATCCAAGCCGAAGAGA
CGGGCGCGAGTTACGACTTACCAGCAGGCCAACAACTTACCCTTGCGCAAACTGTCCCAGGTGTTCAGCCTGTCGGCCTT
ACAGGTGATATTTCAGGCGGTGCCGATATTGAGCCTGTCTCTCAAGTGCTAGAGCGCTTGCTGTTTCGCAAGCGTAATCC
GCCAATGGGTGGCGCTCCGCATGACTATGTGGCGTGGTGCCGCGAAGTCGCAGGCGTTACGCGCGCGTGGGCGGTAGATT
TTTACCAAGGCCCATCAACGGTTGGTTATGCGTTCGTGTTTGATAATCGCGCTAGCATTTTGCCTACCGTGACCGATAAG
CAAGCCATGCAGCAATACATCTATCGTCACTCCGATCCTGCAACCGGAACGGATGTTGGTCGTCCGGCTGGCATTGAAGC
GATTGATATTCCTCTTACGCTCAAAGTCACCAATCTAAGCATTCAGTTGACACCAGATACCGAAGAGAACCGCACCGCTG
TACAAACTAACCTCGATGCTTACTGGCGAACTTTATCGCCTGGTTCAACCTTGGTGCTCAGCAAAGTGCGCACGGCCATT
GGTGAAGTCGATTCAGTGAGTGACTATATTCTCGATTTGTCTGCCGACGTGCCATCGGCCGCCGAAGAGCTGCACGCGCT
AGGAGTGATCACATGGGCCACTCTGTAG

Upstream 100 bases:

>100_bases
TCAATCCCAAGGTTTCAAACCTTGGCCTTAACCATCACGATCACAAAGCCAGACGAAACCGAGCTGACTTTAACTGTATC
CAAACGATGGGAGGCGCAAA

Downstream 100 bases:

>100_bases
AGCAATGGTCAAACTCAATCATGCAGCTAATGCCGCGCGGGGTGATTTGGCAGCGTGAAACGACTTTAGATCTCTATAAG
TACGCCGCAGGGTATGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MPYSTPTLRQLIETGLIDIETSLDQVLPKFGVEQALNVAVSGAIRDLYDYNSWIVRQIIPTSESDDQTIIDTARTEGVIR
KLASASAGPVTFTGNAPIPVSTVMTHQDGRSYRVTSSAAPSGGSVVVQIQAEETGASYDLPAGQQLTLAQTVPGVQPVGL
TGDISGGADIEPVSQVLERLLFRKRNPPMGGAPHDYVAWCREVAGVTRAWAVDFYQGPSTVGYAFVFDNRASILPTVTDK
QAMQQYIYRHSDPATGTDVGRPAGIEAIDIPLTLKVTNLSIQLTPDTEENRTAVQTNLDAYWRTLSPGSTLVLSKVRTAI
GEVDSVSDYILDLSADVPSAAEELHALGVITWATL

Sequences:

>Translated_355_residues
MPYSTPTLRQLIETGLIDIETSLDQVLPKFGVEQALNVAVSGAIRDLYDYNSWIVRQIIPTSESDDQTIIDTARTEGVIR
KLASASAGPVTFTGNAPIPVSTVMTHQDGRSYRVTSSAAPSGGSVVVQIQAEETGASYDLPAGQQLTLAQTVPGVQPVGL
TGDISGGADIEPVSQVLERLLFRKRNPPMGGAPHDYVAWCREVAGVTRAWAVDFYQGPSTVGYAFVFDNRASILPTVTDK
QAMQQYIYRHSDPATGTDVGRPAGIEAIDIPLTLKVTNLSIQLTPDTEENRTAVQTNLDAYWRTLSPGSTLVLSKVRTAI
GEVDSVSDYILDLSADVPSAAEELHALGVITWATL
>Mature_354_residues
PYSTPTLRQLIETGLIDIETSLDQVLPKFGVEQALNVAVSGAIRDLYDYNSWIVRQIIPTSESDDQTIIDTARTEGVIRK
LASASAGPVTFTGNAPIPVSTVMTHQDGRSYRVTSSAAPSGGSVVVQIQAEETGASYDLPAGQQLTLAQTVPGVQPVGLT
GDISGGADIEPVSQVLERLLFRKRNPPMGGAPHDYVAWCREVAGVTRAWAVDFYQGPSTVGYAFVFDNRASILPTVTDKQ
AMQQYIYRHSDPATGTDVGRPAGIEAIDIPLTLKVTNLSIQLTPDTEENRTAVQTNLDAYWRTLSPGSTLVLSKVRTAIG
EVDSVSDYILDLSADVPSAAEELHALGVITWATL

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mu gp47/PBSX XkdT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006949 [H]

Pfam domain/function: PF04865 Baseplate_J [H]

EC number: NA

Molecular weight: Translated: 38044; Mature: 37913

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSTPTLRQLIETGLIDIETSLDQVLPKFGVEQALNVAVSGAIRDLYDYNSWIVRQIIP
CCCCCHHHHHHHHCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHEEHHHCC
TSESDDQTIIDTARTEGVIRKLASASAGPVTFTGNAPIPVSTVMTHQDGRSYRVTSSAAP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHEEEECCCCCEEEEECCCCC
SGGSVVVQIQAEETGASYDLPAGQQLTLAQTVPGVQPVGLTGDISGGADIEPVSQVLERL
CCCEEEEEEEECCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LFRKRNPPMGGAPHDYVAWCREVAGVTRAWAVDFYQGPSTVGYAFVFDNRASILPTVTDK
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCH
QAMQQYIYRHSDPATGTDVGRPAGIEAIDIPLTLKVTNLSIQLTPDTEENRTAVQTNLDA
HHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEEECCCCCCCCEEEEECHHH
YWRTLSPGSTLVLSKVRTAIGEVDSVSDYILDLSADVPSAAEELHALGVITWATL
HHEECCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHEEEECC
>Mature Secondary Structure 
PYSTPTLRQLIETGLIDIETSLDQVLPKFGVEQALNVAVSGAIRDLYDYNSWIVRQIIP
CCCCHHHHHHHHCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHEEHHHCC
TSESDDQTIIDTARTEGVIRKLASASAGPVTFTGNAPIPVSTVMTHQDGRSYRVTSSAAP
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHEEEECCCCCEEEEECCCCC
SGGSVVVQIQAEETGASYDLPAGQQLTLAQTVPGVQPVGLTGDISGGADIEPVSQVLERL
CCCEEEEEEEECCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
LFRKRNPPMGGAPHDYVAWCREVAGVTRAWAVDFYQGPSTVGYAFVFDNRASILPTVTDK
HHHCCCCCCCCCCHHHHHHHHHHHCCHHHEEEEEECCCCCEEEEEEECCCCCCCCCCCCH
QAMQQYIYRHSDPATGTDVGRPAGIEAIDIPLTLKVTNLSIQLTPDTEENRTAVQTNLDA
HHHHHHHHHCCCCCCCCCCCCCCCCEEEECEEEEEEEEEEEEECCCCCCCCEEEEECHHH
YWRTLSPGSTLVLSKVRTAIGEVDSVSDYILDLSADVPSAAEELHALGVITWATL
HHEECCCCCHHHHHHHHHHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]