| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673388
Identifier: 147673388
GI number: 147673388
Start: 718798
End: 719247
Strand: Direct
Name: 147673388
Synonym: VC0395_A0695
Alternate gene names: NA
Gene position: 718798-719247 (Clockwise)
Preceding gene: 147674662
Following gene: 147675708
Centisome position: 23.77
GC content: 50.67
Gene sequence:
>450_bases ATGAGCAGCATCTTGCTGAACATGTTGGAAAACACTGGAGTCATCATCGAGGGCGAAGTTCCTGAGCAATCAGTAACCGC CCTCGTTTTGATCTCGTTGTTTACTGACGCCAGAGCGGAAAGCTCAGACACCATTCCAGATGGAACCGCAGATCAGCGCG GTTGGCCTGGTGATTCATTTTATGATGCGGCTTGGGGTTCCAAGCTTTGGCTTTTGTATCGAGAGAAGTTAACCACCGAT GTGCGCAACCGTGCTGTTAAGTACGCAGAAGACGCGCTGGCATGGATGACGAAGGACTCAGGCACTGGAAAGATTGCCAA GAGCGTGACGGTTGAGGGTTCAATCCCAAGGTTTCAAACCTTGGCCTTAACCATCACGATCACAAAGCCAGACGAAACCG AGCTGACTTTAACTGTATCCAAACGATGGGAGGCGCAAAGTGCCCTATAG
Upstream 100 bases:
>100_bases TTAGCGGTTCAGATTTAACCGCAGGCAACATCAGCTATCTAGGTCATAAACACAGAGACGCAGAGAACAGGCTTACAGGT ACACCAACACTAGGATAGTT
Downstream 100 bases:
>100_bases CACTCCAACGCTACGACAACTGATTGAGACGGGTTTAATCGACATTGAAACCTCGTTAGATCAGGTGCTGCCAAAATTCG GCGTTGAGCAAGCGCTCAAC
Product: phage protein GP46
Products: NA
Alternate protein names: GP46 Family Protein; Bacteriophage Protein GP; Mu-Like Prophage FluMu Protein; Bacteriophage Protein; Mu-Like Phage Protein Gp; Bacteriophage Mu-Like
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MSSILLNMLENTGVIIEGEVPEQSVTALVLISLFTDARAESSDTIPDGTADQRGWPGDSFYDAAWGSKLWLLYREKLTTD VRNRAVKYAEDALAWMTKDSGTGKIAKSVTVEGSIPRFQTLALTITITKPDETELTLTVSKRWEAQSAL
Sequences:
>Translated_149_residues MSSILLNMLENTGVIIEGEVPEQSVTALVLISLFTDARAESSDTIPDGTADQRGWPGDSFYDAAWGSKLWLLYREKLTTD VRNRAVKYAEDALAWMTKDSGTGKIAKSVTVEGSIPRFQTLALTITITKPDETELTLTVSKRWEAQSAL >Mature_148_residues SSILLNMLENTGVIIEGEVPEQSVTALVLISLFTDARAESSDTIPDGTADQRGWPGDSFYDAAWGSKLWLLYREKLTTDV RNRAVKYAEDALAWMTKDSGTGKIAKSVTVEGSIPRFQTLALTITITKPDETELTLTVSKRWEAQSAL
Specific function: Unknown
COG id: COG4381
COG function: function code S; Mu-like prophage protein gp46
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16385; Mature: 16253
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSILLNMLENTGVIIEGEVPEQSVTALVLISLFTDARAESSDTIPDGTADQRGWPGDSF CCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC YDAAWGSKLWLLYREKLTTDVRNRAVKYAEDALAWMTKDSGTGKIAKSVTVEGSIPRFQT CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCEEE LALTITITKPDETELTLTVSKRWEAQSAL EEEEEEEECCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure SSILLNMLENTGVIIEGEVPEQSVTALVLISLFTDARAESSDTIPDGTADQRGWPGDSF CHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC YDAAWGSKLWLLYREKLTTDVRNRAVKYAEDALAWMTKDSGTGKIAKSVTVEGSIPRFQT CCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCEEE LALTITITKPDETELTLTVSKRWEAQSAL EEEEEEEECCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA