| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147675597
Identifier: 147675597
GI number: 147675597
Start: 1027053
End: 1027361
Strand: Reverse
Name: 147675597
Synonym: VC0395_A0990
Alternate gene names: NA
Gene position: 1027361-1027053 (Counterclockwise)
Preceding gene: 147673194
Following gene: 147673096
Centisome position: 33.97
GC content: 44.34
Gene sequence:
>309_bases ATGAATATCGACCTAAACCTGATCCCAACCACTTTTGATATGCTCCATGCTGGGCTAGCAGCTTCGTCAGTACTGCTATT GATTGTTGCCATTGCTCGTAAAGGCAAAGTGACAGAAAAGATCGTAGAAAAACCCGTCGAAAAGATTGTGACGGTTGAAA AGCCAGTAGAAAAAATCATCGAAGTGGAAAAATCGTCGAAATTGAAAAAGTCGTGGAACGAGTCGTTGAAGTGGAATCCA AACTCGCAACCGCCTCAACCGATTCAGCACTGCAACTTCTCTCGCTGCTGCAAAAAGAAGCTCGCCTAA
Upstream 100 bases:
>100_bases CTGTGTGATGAAAGAGAGCAAACAGCCCGCCCGTAGCTTCAAGTCCGGGTATAGAAACTTGTTGTGCCTTGAGCACAGAG TCTGCAAAAGAGAATTCACG
Downstream 100 bases:
>100_bases TTGACTTCTTACAAGAAGAAGTGAGCCAGTTTTCGGATGAAGAAGTGGGCGCAGCCGCTCGCGTGATTCATAGTGGCGGC CAAAAAGTGCTGCGCGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 102
Protein sequence:
>102_residues MNIDLNLIPTTFDMLHAGLAASSVLLLIVAIARKGKVTEKIVEKPVEKIVTVEKPVEKIIEVEKSSKLKKSWNESLKWNP NSQPPQPIQHCNFSRCCKKKLA
Sequences:
>Translated_102_residues MNIDLNLIPTTFDMLHAGLAASSVLLLIVAIARKGKVTEKIVEKPVEKIVTVEKPVEKIIEVEKSSKLKKSWNESLKWNP NSQPPQPIQHCNFSRCCKKKLA >Mature_102_residues MNIDLNLIPTTFDMLHAGLAASSVLLLIVAIARKGKVTEKIVEKPVEKIVTVEKPVEKIIEVEKSSKLKKSWNESLKWNP NSQPPQPIQHCNFSRCCKKKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11462; Mature: 11462
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDLNLIPTTFDMLHAGLAASSVLLLIVAIARKGKVTEKIVEKPVEKIVTVEKPVEKII CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH EVEKSSKLKKSWNESLKWNPNSQPPQPIQHCNFSRCCKKKLA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHCC >Mature Secondary Structure MNIDLNLIPTTFDMLHAGLAASSVLLLIVAIARKGKVTEKIVEKPVEKIVTVEKPVEKII CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH EVEKSSKLKKSWNESLKWNPNSQPPQPIQHCNFSRCCKKKLA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA