| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673194
Identifier: 147673194
GI number: 147673194
Start: 1030315
End: 1030779
Strand: Reverse
Name: 147673194
Synonym: VC0395_A0994
Alternate gene names: NA
Gene position: 1030779-1030315 (Counterclockwise)
Preceding gene: 147675320
Following gene: 147675597
Centisome position: 34.09
GC content: 50.32
Gene sequence:
>465_bases TTGCCTATGTTTAATGCACTCACCTCCCTGTTTAAGCAGCTTCTTGAAGGTCAAGACTTAGCTCAACACTCTGCCACACC AGAGCTGGCTATCGCCTGTCTGCTCAGCGAAGTGGCTGGCGCAGATCAACAAATTTCAGCGCCAGAGCAACAAGCTAAGC TGGCACTGTTGCAGCATTTGCTCCAATGTACGGCTGAGCAAGCCAGCGACTTACTCATGCGCGCAGAGCAAGAAGTCAAA CAATCTGCGTCACTGTACGATTTTACTTCCCAGCTACGTAGCCTCTCTCAAACACAACGGTTTGAGCTGATCAAAGCGAT GTGGGAAGTGGCCAACGCGGATGGCACGATTGATCCGCTTGAAGATGCGGTAATTCGTAAGGCCGCTGAGCTGCTGTATG TCGATCACAGTCAGTTTATTCGCGCCAAACTGATGGCCGCAGACAAACATCAATCACCAGAATAA
Upstream 100 bases:
>100_bases GAACGCACTAGCTCAGAATTTATCGAAATTTTAGGTGCTATGCTTGAAGAGTGACGCTCAAGGCCACATTGTTTAACCTA CGACTCCCAATCTCCAAGGC
Downstream 100 bases:
>100_bases CGCCGCGCGTTATCGGCTCCGACACTCTCTCCCTTTGTCTGAAAGACAAAAAGCGCGAAATTCGCGCTTTTGAACTTGGG CTTTCATCTAGAACTTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MPMFNALTSLFKQLLEGQDLAQHSATPELAIACLLSEVAGADQQISAPEQQAKLALLQHLLQCTAEQASDLLMRAEQEVK QSASLYDFTSQLRSLSQTQRFELIKAMWEVANADGTIDPLEDAVIRKAAELLYVDHSQFIRAKLMAADKHQSPE
Sequences:
>Translated_154_residues MPMFNALTSLFKQLLEGQDLAQHSATPELAIACLLSEVAGADQQISAPEQQAKLALLQHLLQCTAEQASDLLMRAEQEVK QSASLYDFTSQLRSLSQTQRFELIKAMWEVANADGTIDPLEDAVIRKAAELLYVDHSQFIRAKLMAADKHQSPE >Mature_153_residues PMFNALTSLFKQLLEGQDLAQHSATPELAIACLLSEVAGADQQISAPEQQAKLALLQHLLQCTAEQASDLLMRAEQEVKQ SASLYDFTSQLRSLSQTQRFELIKAMWEVANADGTIDPLEDAVIRKAAELLYVDHSQFIRAKLMAADKHQSPE
Specific function: Unknown
COG id: COG4103
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17068; Mature: 16936
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMFNALTSLFKQLLEGQDLAQHSATPELAIACLLSEVAGADQQISAPEQQAKLALLQHL CCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LQCTAEQASDLLMRAEQEVKQSASLYDFTSQLRSLSQTQRFELIKAMWEVANADGTIDPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EDAVIRKAAELLYVDHSQFIRAKLMAADKHQSPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PMFNALTSLFKQLLEGQDLAQHSATPELAIACLLSEVAGADQQISAPEQQAKLALLQHL CHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LQCTAEQASDLLMRAEQEVKQSASLYDFTSQLRSLSQTQRFELIKAMWEVANADGTIDPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH EDAVIRKAAELLYVDHSQFIRAKLMAADKHQSPE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA