Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is rstA1

Identifier: 147675447

GI number: 147675447

Start: 1119565

End: 1120644

Strand: Reverse

Name: rstA1

Synonym: VC0395_A1066

Alternate gene names: NA

Gene position: 1120644-1119565 (Counterclockwise)

Preceding gene: 147674737

Following gene: 147674635

Centisome position: 37.06

GC content: 45.37

Gene sequence:

>1080_bases
ATGAAAAAGCAGATTTTCACTCTTGATGAATTACAACTCGATACAAACGCTTCTCCGTTTGTTTTTGTCGATTATCTTGC
TTGGTCGGTTCCTTATGCTTCATTCCGTCACGCGCATAAGTCCGATTTGTCCTCGCTTATCTGGGCGCCTCTTCCTAAGC
CTGATTACCGTATGGCTCGCACACCTGAGCAAAAAGAGAAGTTAATCGAGCTTTATAAGCAGAAGTGGAACGTTGCCATG
ATGGAACGCTTGGAGGTCTTTTGCCTTCATGTTCTTGGTCTTCGTATGTCGCCTTGGCGCGATAAGGGGCTTTATGGGTA
TGAAAACTCATGCCATTTGATGTCTAAGTACTCCAATAAACACGTGGGCTTTGTTGCGCTAGGGGGAAACCGTAATACCT
GTTACTTCCAAATTGAGGGAGTAGGGTGTCGAACCGTGTTAGAGCACACCTCTTTATTCCGTCTTCATTGGTGGCTCGAT
TTATTAGGTTGCTCTCGTCTGTCTCGTATTGATTTAGCCGTTGATGACTTTCACGGTTTGTTTGGCCGTGAGTACGCCAA
AAAAGCCTATTCCGATGACGCCTTTCGCACCGCTAGAGCGGGACGTGCCCCTAACGGTGGTGAGCGATTAGTCTCTGAGC
CTAATGGCAAAATCATCAATGAATCTTTCGAGGTAGGCTCTCGTGAATCTCGCATTTACTGGCGTATCTACAACAAGGCT
GCTCAGCTTGGTTTAGATATGCACTGGTTTCGTAATGAGGTCGAGCTTAAAGATATGCCTATCGACGTTCTGCTCAATAT
CGAGGGGTATTTTGCAGGTTTGTGCGCGTACTCGGCCTCAATTATCAATTCCTTGCCTGTCAAGGTGGTCACAAAAAAGC
GTCAAGTGGCGCTTGATATCCACTCACGCATTAAGTGGGCTCGTCGTCAGGTCGGTAAGACGTTGTTTGATATTTCAAAG
CATTTTGGTGGTGATTTGGAAAGGGTGTTTGGGGCGTTGATTTCTAAGGAAATTCACGACGATTCACTCAACCTTCCAGA
TTCTTATATGAAGTTAATTGATGAAATTATGGGTGATTAA

Upstream 100 bases:

>100_bases
GAACATTATAATCCCTGTTTTTTTGGACAGCTGTTTACAATCCCAATATTTTGGGATAACTTATCACTATAAATTGAACT
TGACAGGTTTTTGAAGGCTA

Downstream 100 bases:

>100_bases
TATGAAATCTCGTTTTGTTGTTTTTGGTGCCTCTCATTCTGAAGGGGTGAGTAAGACTGGTGCTCCTTACCTTATCCCAG
TGCTTTTTGTTGGTAAGCCG

Product: RstA1 protein

Products: NA

Alternate protein names: Phage Replication Protein; RstA2 Protein; Replication Initiation Factor Family Protein; Phage Replication Initiation Protein; Transcriptional Regulatory Protein RstA; Replication Protein; Rep-VSK; Phage Replication Initiation Factor; Phage Replication And Integration Protein

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAPLPKPDYRMARTPEQKEKLIELYKQKWNVAM
MERLEVFCLHVLGLRMSPWRDKGLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLD
LLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKA
AQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDIHSRIKWARRQVGKTLFDISK
HFGGDLERVFGALISKEIHDDSLNLPDSYMKLIDEIMGD

Sequences:

>Translated_359_residues
MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAPLPKPDYRMARTPEQKEKLIELYKQKWNVAM
MERLEVFCLHVLGLRMSPWRDKGLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLD
LLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKA
AQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDIHSRIKWARRQVGKTLFDISK
HFGGDLERVFGALISKEIHDDSLNLPDSYMKLIDEIMGD
>Mature_359_residues
MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAPLPKPDYRMARTPEQKEKLIELYKQKWNVAM
MERLEVFCLHVLGLRMSPWRDKGLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLD
LLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKA
AQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDIHSRIKWARRQVGKTLFDISK
HFGGDLERVFGALISKEIHDDSLNLPDSYMKLIDEIMGD

Specific function: Unknown

COG id: COG2946

COG function: function code L; Putative phage replication protein RstA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41397; Mature: 41397

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAPLPKPDYRMAR
CCCCEEEHHHEEECCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPEQKEKLIELYKQKWNVAMMERLEVFCLHVLGLRMSPWRDKGLYGYENSCHLMSKYSNK
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
HVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLDLLGCSRLSRIDLAVDDFHGL
CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHH
FGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKA
HHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHCCCCCCEECCHHCCCCCCCEEEEEEEHHH
AQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDI
HHHCCCHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
HSRIKWARRQVGKTLFDISKHFGGDLERVFGALISKEIHDDSLNLPDSYMKLIDEIMGD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAPLPKPDYRMAR
CCCCEEEHHHEEECCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPEQKEKLIELYKQKWNVAMMERLEVFCLHVLGLRMSPWRDKGLYGYENSCHLMSKYSNK
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCC
HVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLDLLGCSRLSRIDLAVDDFHGL
CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHH
FGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKA
HHHHHHHHHCCCHHHHHHHCCCCCCCCCHHHCCCCCCEECCHHCCCCCCCEEEEEEEHHH
AQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDI
HHHCCCHHHHCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHH
HSRIKWARRQVGKTLFDISKHFGGDLERVFGALISKEIHDDSLNLPDSYMKLIDEIMGD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA