| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is rstB2
Identifier: 147674635
GI number: 147674635
Start: 1119207
End: 1119587
Strand: Reverse
Name: rstB2
Synonym: VC0395_A1065
Alternate gene names: NA
Gene position: 1119587-1119207 (Counterclockwise)
Preceding gene: 147675447
Following gene: 147673551
Centisome position: 37.02
GC content: 45.14
Gene sequence:
>381_bases TTGATGAAATTATGGGTGATTAATATGAAATCTCGTTTTGTTGTTTTTGGTGCCTCTCATTCTGAAGGGGTGAGTAAGAC TGGTGCTCCTTACCTTATCCCAGTGCTTTTTGTTGGTAAGCCGATTCGCCAGTGGAAAAACGATAAAGGCCAATGTTTGA CGTTTGGCTTGCAGCATCAGGAAGTGAAATTTGTATCCAGTGACGCGATGACCAGAAAACTCGAACAGACCGCCTTTCCG GTTCTTGTCACGTTTGACAATGAGCCAGACCCAGAAGACCCATCGCGTAACCTCGTGATTGATTATCAAGTGGTGTGTTC CTTGTTTGACAACGTGCCGGGCGGCAAGCCATTGGATAAACCTCAACCCATTAAATCTTGA
Upstream 100 bases:
>100_bases AAGCATTTTGGTGGTGATTTGGAAAGGGTGTTTGGGGCGTTGATTTCTAAGGAAATTCACGACGATTCACTCAACCTTCC AGATTCTTATATGAAGTTAA
Downstream 100 bases:
>100_bases TGGACTTAACCCATTATGTCTGGAGCGAGGCGCTCTATTTCGCGGTGGTCAAGGCCGTTCTCGTTCTGTTCTTTACATCC TTTGGGATTGGCGCGGTTGC
Product: RstB2 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MMKLWVINMKSRFVVFGASHSEGVSKTGAPYLIPVLFVGKPIRQWKNDKGQCLTFGLQHQEVKFVSSDAMTRKLEQTAFP VLVTFDNEPDPEDPSRNLVIDYQVVCSLFDNVPGGKPLDKPQPIKS
Sequences:
>Translated_126_residues MMKLWVINMKSRFVVFGASHSEGVSKTGAPYLIPVLFVGKPIRQWKNDKGQCLTFGLQHQEVKFVSSDAMTRKLEQTAFP VLVTFDNEPDPEDPSRNLVIDYQVVCSLFDNVPGGKPLDKPQPIKS >Mature_126_residues MMKLWVINMKSRFVVFGASHSEGVSKTGAPYLIPVLFVGKPIRQWKNDKGQCLTFGLQHQEVKFVSSDAMTRKLEQTAFP VLVTFDNEPDPEDPSRNLVIDYQVVCSLFDNVPGGKPLDKPQPIKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14152; Mature: 14152
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKLWVINMKSRFVVFGASHSEGVSKTGAPYLIPVLFVGKPIRQWKNDKGQCLTFGLQHQ CEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEHHHCCCHHHHHCCCCCCEEEECCCCC EVKFVSSDAMTRKLEQTAFPVLVTFDNEPDPEDPSRNLVIDYQVVCSLFDNVPGGKPLDK EEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCC PQPIKS CCCCCC >Mature Secondary Structure MMKLWVINMKSRFVVFGASHSEGVSKTGAPYLIPVLFVGKPIRQWKNDKGQCLTFGLQHQ CEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEHHHCCCHHHHHCCCCCCEEEECCCCC EVKFVSSDAMTRKLEQTAFPVLVTFDNEPDPEDPSRNLVIDYQVVCSLFDNVPGGKPLDK EEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCC PQPIKS CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA