Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147675386

Identifier: 147675386

GI number: 147675386

Start: 1240164

End: 1240622

Strand: Reverse

Name: 147675386

Synonym: VC0395_A1179

Alternate gene names: NA

Gene position: 1240622-1240164 (Counterclockwise)

Preceding gene: 147674593

Following gene: 147673036

Centisome position: 41.02

GC content: 45.97

Gene sequence:

>459_bases
ATGTCGAATACACACCAAGGCTTAAAAGCGGTCGCGATTTTAGAGTCGACCAAAGGGATTGTGTCGCTATTGTTGGGGTT
AGGGCTGCACTATGTTGCTGGCGATAGCCTACAGCAGTTGTTGCTAGATCTGTTACAGCACTTGCACCTTAATCCTGCCA
GTTATTGGCCAGAGAAATTACTGCATCAAGCGGGGCTTCTCACCCATTTCAATTTGAACTGGGTGGCCGCAGGTGCGCTA
GTGTATGGTGCGATCCGTTTGATTGAAGCTTATGGTCTTTGGCACAACTTATTATGGACGGAGTGGTTTGCACTGCTCAG
CGGAGCCATCTATCTACCATTTGAAGTGTATGAGTTGTTTACCCATCCTGGTGTATTCAGTATGGCGGCTCTACTGATTA
ACCTAGTTATTGTGCTTTATATGTATCGGATTATCCGCAATAAAGTACCGCAAAGGTAA

Upstream 100 bases:

>100_bases
AGGCGTTGATCCAAGAGATTTACCCCAATATCGATGAGCTGTATGTCATTACTTATCAACTAGCGAAGTCATCGAGCGCA
AGAATCATGGTGAAATAAGC

Downstream 100 bases:

>100_bases
GATGCAAACGGCATGGCGCTCCTATAGACTAGCGGCGCCGTAGTTTGGGACGGTTATCCAAAGAGGACAGAGTAAAAATG
AATCCGATTGTGGTCAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSNTHQGLKAVAILESTKGIVSLLLGLGLHYVAGDSLQQLLLDLLQHLHLNPASYWPEKLLHQAGLLTHFNLNWVAAGAL
VYGAIRLIEAYGLWHNLLWTEWFALLSGAIYLPFEVYELFTHPGVFSMAALLINLVIVLYMYRIIRNKVPQR

Sequences:

>Translated_152_residues
MSNTHQGLKAVAILESTKGIVSLLLGLGLHYVAGDSLQQLLLDLLQHLHLNPASYWPEKLLHQAGLLTHFNLNWVAAGAL
VYGAIRLIEAYGLWHNLLWTEWFALLSGAIYLPFEVYELFTHPGVFSMAALLINLVIVLYMYRIIRNKVPQR
>Mature_151_residues
SNTHQGLKAVAILESTKGIVSLLLGLGLHYVAGDSLQQLLLDLLQHLHLNPASYWPEKLLHQAGLLTHFNLNWVAAGALV
YGAIRLIEAYGLWHNLLWTEWFALLSGAIYLPFEVYELFTHPGVFSMAALLINLVIVLYMYRIIRNKVPQR

Specific function: Unknown

COG id: COG3305

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17159; Mature: 17027

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTHQGLKAVAILESTKGIVSLLLGLGLHYVAGDSLQQLLLDLLQHLHLNPASYWPEKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHCCHHHH
LHQAGLLTHFNLNWVAAGALVYGAIRLIEAYGLWHNLLWTEWFALLSGAIYLPFEVYELF
HHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
THPGVFSMAALLINLVIVLYMYRIIRNKVPQR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SNTHQGLKAVAILESTKGIVSLLLGLGLHYVAGDSLQQLLLDLLQHLHLNPASYWPEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHCCHHHH
LHQAGLLTHFNLNWVAAGALVYGAIRLIEAYGLWHNLLWTEWFALLSGAIYLPFEVYELF
HHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
THPGVFSMAALLINLVIVLYMYRIIRNKVPQR
HCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA