Click here to switch to the map view.

The map label for this gene is yxkH [H]

Identifier: 147675347

GI number: 147675347

Start: 2769615

End: 2771387

Strand: Reverse

Name: yxkH [H]

Synonym: VC0395_A2619

Alternate gene names: 147675347

Gene position: 2771387-2769615 (Counterclockwise)

Preceding gene: 147674538

Following gene: 147674213

Centisome position: 91.64

GC content: 45.23

Gene sequence:

>1773_bases
ATGAATATTTTGATGGCCCTATCCCAACTCGAAGTAACGGGAGCTGAGGTGTATGCCACTAGTGTAGGTAATGAGCTCAC
TCGACGTGGCCATCAGGTATTTTATGTTTCCGATACGCTCACCAAAGCTCACGATGGCCTGTTTTTTAAACTGCGCTTTA
ATAAACGCAGCATCCCGCGGCGCTTTTGGCATGTCGCCTATCTGGTTTACCTGATCAAGAAACATCAGATCCAGTTAGTC
CATGCTCACTCACGAGCATCAAGCTGGAGTTGCCATATTGCCTGCCGCTTGACTAATACCCCTATGGTTACCACGGTCCA
TGGTCGTCAACCGGTACATGTTTCGCGCAAAAAATTCCATGCAATGGGAGATAAAGCGCTTCCGGTTTGTGAAGCGATAC
GAGAGCAATTAATCAAAGATCTCAATGTACCGGAGAGCCAACTGCACGTAAGCCGTAATGGGATAGAAACAAGTATCTTT
AAACGCAGCGCAGCACCCAATAATCCTAAGCCAGTTATCTCTATCATTGGCCGACTCAGTGGCCCTAAAGGTGAACTTTG
CTATAGGTTGCTAACCGAGTGTTTAGACCTCGACCGCTACCAAGTACAAGTGATCACAGGTACACCGTTAACTGAGCGTT
TTAGCGCACTGCAAGATAAAGTCTCATTTCCCGGCTACAGCGCCAACGTTGAACAGATCATGGCTCAATCAGATTTGGTG
ATTGGTGCAGGACGAGTCGCGATGGAGGCACTCCTATGTGGCCGCCCGACCCTTGCGATTGGTGAAGCAAGCTGCGTGGG
GATTATCGAACTGGATAATCTAAACCAAGCCATGGCAACCAATTTTGGCGACATCGGTCCACACGATCTGGCGATAGATT
TCCAGCAAATCCCCGCTTTGATTGAGCAAGGCCTAAGTCAACCGCACTGCACTCAAGAGATCACTGAACAGATCAAGCTT
AACTATGATTTACAAGTGATTGTGAATGAGCTTGAAAACCTTTATCAAACGTTTTATGTCAACAAGTTACAACGAGAAGT
CCCCATCATCATGTACCACCGCTTTATTCGTGATGACAGCGAAAAAGGTGTACATGGTACTTATTTGCATGTTCAGCAGC
TTGAGAAACATTTTCAGTTGCTTAAAAAGATGGGCTTTGAAACTCTGACCTTCAAAGATCTCTCTGAGAAGGGATTTATT
CATCGCTTACAACCAGGTAAGCGTTTTATCATAATTACCGTGGATGATGGCTATCGCGACAACTATGACTTGTTACTGCC
ACTGCTCAAAAAGTATCAATTTAAAGCCGTGGTGTATGTGGTGACTGGCGAGAATTTTAATCGCTGGGATGTCGAAGTGA
GTGACAACCCTGAAAAAGTGGTCCCTTTGATGTCACCGGAGCAAGTTAAAGCGTTACATGACTCTGGATTAGTAGAGATT
GGTGGTCATACGATGACTCATCCCTTTTTGAGTAAGCTCAGTGAATCGGAACAACGCGAAGAAATATTGCGCAACAAACT
CGAACTTGAAGCGCTAATCGGAGAGCCACTGACCTCCTTTGCTTATCCTTATGGTGACCATGATGCAACCTCTAAACAAC
TGGCTCAGGATCTGGGTTACCCATTTGCCGTAGCGACCAACAGTGGTCCACTTTTGATGCATCAAGATCCCTATCAAATT
CGTCGGATTGCGATTTTTCCAAGAACCGACACTTTTGGTCTGTGGCGAAAAGTGAAAGGGAATTATCTATTTAGAAAAAT
GAACAAAAAATAA

Upstream 100 bases:

>100_bases
CTCTTTGTAGAGGGGATAGATGAATTACCTTCCAAAAGAGAATATGTAAGAAATTAGCCCTGTAAGGGGTGTATTATCAG
ATGTGGAAATTGGAGTTTAG

Downstream 100 bases:

>100_bases
TAAGAGGTTGCAGATGGCTGGCTTTGGTTTAATTGCAAAATTACGTAATAAAATTCGGGTAAAACCTAACAACAAGATTC
AAATAGGTAAAAATACTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 590

Protein sequence:

>590_residues
MNILMALSQLEVTGAEVYATSVGNELTRRGHQVFYVSDTLTKAHDGLFFKLRFNKRSIPRRFWHVAYLVYLIKKHQIQLV
HAHSRASSWSCHIACRLTNTPMVTTVHGRQPVHVSRKKFHAMGDKALPVCEAIREQLIKDLNVPESQLHVSRNGIETSIF
KRSAAPNNPKPVISIIGRLSGPKGELCYRLLTECLDLDRYQVQVITGTPLTERFSALQDKVSFPGYSANVEQIMAQSDLV
IGAGRVAMEALLCGRPTLAIGEASCVGIIELDNLNQAMATNFGDIGPHDLAIDFQQIPALIEQGLSQPHCTQEITEQIKL
NYDLQVIVNELENLYQTFYVNKLQREVPIIMYHRFIRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFI
HRLQPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQVKALHDSGLVEI
GGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQI
RRIAIFPRTDTFGLWRKVKGNYLFRKMNKK

Sequences:

>Translated_590_residues
MNILMALSQLEVTGAEVYATSVGNELTRRGHQVFYVSDTLTKAHDGLFFKLRFNKRSIPRRFWHVAYLVYLIKKHQIQLV
HAHSRASSWSCHIACRLTNTPMVTTVHGRQPVHVSRKKFHAMGDKALPVCEAIREQLIKDLNVPESQLHVSRNGIETSIF
KRSAAPNNPKPVISIIGRLSGPKGELCYRLLTECLDLDRYQVQVITGTPLTERFSALQDKVSFPGYSANVEQIMAQSDLV
IGAGRVAMEALLCGRPTLAIGEASCVGIIELDNLNQAMATNFGDIGPHDLAIDFQQIPALIEQGLSQPHCTQEITEQIKL
NYDLQVIVNELENLYQTFYVNKLQREVPIIMYHRFIRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFI
HRLQPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQVKALHDSGLVEI
GGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQI
RRIAIFPRTDTFGLWRKVKGNYLFRKMNKK
>Mature_590_residues
MNILMALSQLEVTGAEVYATSVGNELTRRGHQVFYVSDTLTKAHDGLFFKLRFNKRSIPRRFWHVAYLVYLIKKHQIQLV
HAHSRASSWSCHIACRLTNTPMVTTVHGRQPVHVSRKKFHAMGDKALPVCEAIREQLIKDLNVPESQLHVSRNGIETSIF
KRSAAPNNPKPVISIIGRLSGPKGELCYRLLTECLDLDRYQVQVITGTPLTERFSALQDKVSFPGYSANVEQIMAQSDLV
IGAGRVAMEALLCGRPTLAIGEASCVGIIELDNLNQAMATNFGDIGPHDLAIDFQQIPALIEQGLSQPHCTQEITEQIKL
NYDLQVIVNELENLYQTFYVNKLQREVPIIMYHRFIRDDSEKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFI
HRLQPGKRFIIITVDDGYRDNYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQVKALHDSGLVEI
GGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGYPFAVATNSGPLLMHQDPYQI
RRIAIFPRTDTFGLWRKVKGNYLFRKMNKK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=239, Percent_Identity=23.8493723849372, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 67109; Mature: 67109

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILMALSQLEVTGAEVYATSVGNELTRRGHQVFYVSDTLTKAHDGLFFKLRFNKRSIPR
CCHHHHHHHHEECCCEEEEEHHCHHHHHCCCEEEEEECCHHHCCCCEEEEEEECCCCCHH
RFWHVAYLVYLIKKHQIQLVHAHSRASSWSCHIACRLTNTPMVTTVHGRQPVHVSRKKFH
HHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHH
AMGDKALPVCEAIREQLIKDLNVPESQLHVSRNGIETSIFKRSAAPNNPKPVISIIGRLS
HCCCCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHCCCCCCCCCHHHHHHHHCC
GPKGELCYRLLTECLDLDRYQVQVITGTPLTERFSALQDKVSFPGYSANVEQIMAQSDLV
CCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEE
IGAGRVAMEALLCGRPTLAIGEASCVGIIELDNLNQAMATNFGDIGPHDLAIDFQQIPAL
EECHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHH
IEQGLSQPHCTQEITEQIKLNYDLQVIVNELENLYQTFYVNKLQREVPIIMYHRFIRDDS
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
EKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPGKRFIIITVDDGYRD
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCCC
NYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQVKALHDSGLVEI
CHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHEECCCCHHHHHHHHCCCCEEE
GGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHCCC
PFAVATNSGPLLMHQDPYQIRRIAIFPRTDTFGLWRKVKGNYLFRKMNKK
CEEEECCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHCCCEEEHCCCCC
>Mature Secondary Structure
MNILMALSQLEVTGAEVYATSVGNELTRRGHQVFYVSDTLTKAHDGLFFKLRFNKRSIPR
CCHHHHHHHHEECCCEEEEEHHCHHHHHCCCEEEEEECCHHHCCCCEEEEEEECCCCCHH
RFWHVAYLVYLIKKHQIQLVHAHSRASSWSCHIACRLTNTPMVTTVHGRQPVHVSRKKFH
HHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHH
AMGDKALPVCEAIREQLIKDLNVPESQLHVSRNGIETSIFKRSAAPNNPKPVISIIGRLS
HCCCCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCHHHHHHCCCCCCCCCHHHHHHHHCC
GPKGELCYRLLTECLDLDRYQVQVITGTPLTERFSALQDKVSFPGYSANVEQIMAQSDLV
CCCHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCEE
IGAGRVAMEALLCGRPTLAIGEASCVGIIELDNLNQAMATNFGDIGPHDLAIDFQQIPAL
EECHHHHHHHHHCCCCCEEECCCCEEEEEEECCCCHHHHCCCCCCCCCCEEEEHHHHHHH
IEQGLSQPHCTQEITEQIKLNYDLQVIVNELENLYQTFYVNKLQREVPIIMYHRFIRDDS
HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
EKGVHGTYLHVQQLEKHFQLLKKMGFETLTFKDLSEKGFIHRLQPGKRFIIITVDDGYRD
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCCC
NYDLLLPLLKKYQFKAVVYVVTGENFNRWDVEVSDNPEKVVPLMSPEQVKALHDSGLVEI
CHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHEECCCCHHHHHHHHCCCCEEE
GGHTMTHPFLSKLSESEQREEILRNKLELEALIGEPLTSFAYPYGDHDATSKQLAQDLGY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHCCC
PFAVATNSGPLLMHQDPYQIRRIAIFPRTDTFGLWRKVKGNYLFRKMNKK
CEEEECCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHCCCEEEHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]