| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675139
Identifier: 147675139
GI number: 147675139
Start: 570037
End: 570477
Strand: Reverse
Name: 147675139
Synonym: VC0395_A0530
Alternate gene names: NA
Gene position: 570477-570037 (Counterclockwise)
Preceding gene: 147674604
Following gene: 147674575
Centisome position: 18.86
GC content: 48.3
Gene sequence:
>441_bases GTGATGAATATAAAAGAGTGGGAAAGGCATACCCTATTAGCCGATATCGCTATGCAGGAGTCAGGCCACCTGCGCAGCAT TCTTCACTATCAACAAGCGCTCACCGTCAGCCAACAGTTGGATGAAAGTGAAGAGATTGACATGGAAGATCGCATGATGA TCTCGGTTATCTCTTGCCACAACATGGCCAAGTTTTGGCGCACCATAGGCGATAACCAATACGAGCTTAAATACCTACAA CTGGCCTCAGAGCGCGTCCTCACGCTCATCCCTCAGTGCCATAAACCGGGTTGTGAAGCTTTTGTTGACTCTCTAGGCTG CTGCCGTAAAGCGCTGCTCGATTTTATGAAGCGCCACCCTAATCCAGAGATCGCACGCATGGTGCAACATATAGATACCG CCTCGAAATGCGAGATTATTGCTCAATTTCGCCTCAATTAA
Upstream 100 bases:
>100_bases TCACCCTTTCTCTACAATGCGTAATTCCCACACAATTCCTGTCATTTACATGATAATAATTATCAATTAATCTGAGGCAA CAGATAATTAAGGAGAAGGT
Downstream 100 bases:
>100_bases CGGTATCACCCAACCAATGCGCTCTCCCAATTCAGGTGTGACTCGCTATCACACCTGAGTTCGGCCTAGTGAAATCACCA CGCGGCGGTTTTTGTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MMNIKEWERHTLLADIAMQESGHLRSILHYQQALTVSQQLDESEEIDMEDRMMISVISCHNMAKFWRTIGDNQYELKYLQ LASERVLTLIPQCHKPGCEAFVDSLGCCRKALLDFMKRHPNPEIARMVQHIDTASKCEIIAQFRLN
Sequences:
>Translated_146_residues MMNIKEWERHTLLADIAMQESGHLRSILHYQQALTVSQQLDESEEIDMEDRMMISVISCHNMAKFWRTIGDNQYELKYLQ LASERVLTLIPQCHKPGCEAFVDSLGCCRKALLDFMKRHPNPEIARMVQHIDTASKCEIIAQFRLN >Mature_146_residues MMNIKEWERHTLLADIAMQESGHLRSILHYQQALTVSQQLDESEEIDMEDRMMISVISCHNMAKFWRTIGDNQYELKYLQ LASERVLTLIPQCHKPGCEAFVDSLGCCRKALLDFMKRHPNPEIARMVQHIDTASKCEIIAQFRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020206 - ProDom: PD087558 [H]
Pfam domain/function: PF10952 DUF2753 [H]
EC number: NA
Molecular weight: Translated: 17021; Mature: 17021
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNIKEWERHTLLADIAMQESGHLRSILHYQQALTVSQQLDESEEIDMEDRMMISVISCH CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NMAKFWRTIGDNQYELKYLQLASERVLTLIPQCHKPGCEAFVDSLGCCRKALLDFMKRHP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC NPEIARMVQHIDTASKCEIIAQFRLN CHHHHHHHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure MMNIKEWERHTLLADIAMQESGHLRSILHYQQALTVSQQLDESEEIDMEDRMMISVISCH CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH NMAKFWRTIGDNQYELKYLQLASERVLTLIPQCHKPGCEAFVDSLGCCRKALLDFMKRHP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC NPEIARMVQHIDTASKCEIIAQFRLN CHHHHHHHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8021208; 12620739 [H]