| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675100
Identifier: 147675100
GI number: 147675100
Start: 628035
End: 628532
Strand: Direct
Name: 147675100
Synonym: VC0395_A0588
Alternate gene names: NA
Gene position: 628035-628532 (Clockwise)
Preceding gene: 147674514
Following gene: 147675684
Centisome position: 20.77
GC content: 54.02
Gene sequence:
>498_bases ATGACGCATCCTACTTGGGAATTACCGGTAGCCGACAATCTGGCGAGTTTAGTGCTCACACCTTGCCCGGGAACCAAAGG TACACCACTGCCGGAAAGCATTGCCCAACTCAAAGCGCAAGGGGTTTCGGCAGTAGTCACGGCGCTAAGCCATGAGGAAA TGGAGCAGCATGGTGTCGGTGAGCTACCAGCGGAAGTCGAAAAAGCCGGATTACAGTGGTTTCATGCGCCGATCGAAGAT GATTGCGCGCCGGATGCGGCCTTTGCGCAAGATTGGCAGCATTGCTCACCCGCTTTGCATCAGGCACTCAGCCGCGGTGA AAAAGTCGCTTTGCATTGCATGGGAGGTTCGGGTCGTACTGGCTTACTGGCCGCGCATCTGCTGCTGGAAAAAGGTTGGC CGCTGGAAAGCATCATTACTCAGGTGCAAGCATTAAGGCCGGGTGCATTTACCAAAGAAGTGCAAGTGCAGTACGTGCAT CAAATCGTCAAACCATAA
Upstream 100 bases:
>100_bases ATGGTGAAGATCTACGCTTGGTATGACAACGAAATGGGTTACGCCACGCGCACCGCAGAATTGGTTCGTAAAGTCGGTTT GGCATAAGGAGTAGTAAAAA
Downstream 100 bases:
>100_bases CCCGATCAAGGGCCGCATAAGCGGCTCTTTTTAAGAGAGTGTTTATGTTGTCCCAACTGAATGCCCATGTTCGTCAGTAC ATGCTCGTGACGTTCAACTA
Product: putative phosphatase
Products: NA
Alternate protein names: Phosphatase; Protein Tyrosine Phosphatase; ADP-Ribosyl-(Dinitrogen Reductase) Hydrolase; Phosphatase Family Protein; Protein-Tyrosine Phosphatase; ADP-Ribosyl Glycohydrolase Family Protein; Ducificity Phosphatase Catalytic Domain Protein; Protein Tyrosine Phosphatase Catalytic Region; Protein Phosphatase
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTHPTWELPVADNLASLVLTPCPGTKGTPLPESIAQLKAQGVSAVVTALSHEEMEQHGVGELPAEVEKAGLQWFHAPIED DCAPDAAFAQDWQHCSPALHQALSRGEKVALHCMGGSGRTGLLAAHLLLEKGWPLESIITQVQALRPGAFTKEVQVQYVH QIVKP
Sequences:
>Translated_165_residues MTHPTWELPVADNLASLVLTPCPGTKGTPLPESIAQLKAQGVSAVVTALSHEEMEQHGVGELPAEVEKAGLQWFHAPIED DCAPDAAFAQDWQHCSPALHQALSRGEKVALHCMGGSGRTGLLAAHLLLEKGWPLESIITQVQALRPGAFTKEVQVQYVH QIVKP >Mature_164_residues THPTWELPVADNLASLVLTPCPGTKGTPLPESIAQLKAQGVSAVVTALSHEEMEQHGVGELPAEVEKAGLQWFHAPIEDD CAPDAAFAQDWQHCSPALHQALSRGEKVALHCMGGSGRTGLLAAHLLLEKGWPLESIITQVQALRPGAFTKEVQVQYVHQ IVKP
Specific function: Unknown
COG id: COG2453
COG function: function code T; Predicted protein-tyrosine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17716; Mature: 17585
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS00383 TYR_PHOSPHATASE_1 ; PS50056 TYR_PHOSPHATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPTWELPVADNLASLVLTPCPGTKGTPLPESIAQLKAQGVSAVVTALSHEEMEQHGVG CCCCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELPAEVEKAGLQWFHAPIEDDCAPDAAFAQDWQHCSPALHQALSRGEKVALHCMGGSGRT CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCH GLLAAHLLLEKGWPLESIITQVQALRPGAFTKEVQVQYVHQIVKP HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure THPTWELPVADNLASLVLTPCPGTKGTPLPESIAQLKAQGVSAVVTALSHEEMEQHGVG CCCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ELPAEVEKAGLQWFHAPIEDDCAPDAAFAQDWQHCSPALHQALSRGEKVALHCMGGSGRT CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCCCH GLLAAHLLLEKGWPLESIITQVQALRPGAFTKEVQVQYVHQIVKP HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA