| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675090
Identifier: 147675090
GI number: 147675090
Start: 1156297
End: 1156533
Strand: Reverse
Name: 147675090
Synonym: VC0395_A1101
Alternate gene names: NA
Gene position: 1156533-1156297 (Counterclockwise)
Preceding gene: 147673795
Following gene: 147674485
Centisome position: 38.24
GC content: 38.82
Gene sequence:
>237_bases GTGCCACCTTATTTTCCAATGAACTATTATTTTTTCTCGCTAAACATTTCTTATCAAACCTTTGTTACGCATTACTCGGG CGTAGCAAGTCATGTCATGGTCACCACCGAGCAAGGTTTGCGTTTACAACTCCCTGCAACACGTTTGCGTCCATTTTTAA GCCAAATTGGAGTAAAAGGTCGATTTCGATTAACAACTGACCAAAATAATCGTTTCGTTAAGTTAGAAGTTCTGTAA
Upstream 100 bases:
>100_bases ATTAAAAGCGATGGATAACCTCGCGCGTGATCTGTTTGAAAAAGTCAGCAAAGCGCTGGAAGCATAAACCAAACTCAACA GGTAAACTCGGTGGCACTCT
Downstream 100 bases:
>100_bases AAGCATTATTTTGTAGTGGTTTAAATAGGTACTTTAGTCACAATCTCACACTTTTACCCCATAACAACCCCAAAACAATT AACTATTTATAAATAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MPPYFPMNYYFFSLNISYQTFVTHYSGVASHVMVTTEQGLRLQLPATRLRPFLSQIGVKGRFRLTTDQNNRFVKLEVL
Sequences:
>Translated_78_residues MPPYFPMNYYFFSLNISYQTFVTHYSGVASHVMVTTEQGLRLQLPATRLRPFLSQIGVKGRFRLTTDQNNRFVKLEVL >Mature_77_residues PPYFPMNYYFFSLNISYQTFVTHYSGVASHVMVTTEQGLRLQLPATRLRPFLSQIGVKGRFRLTTDQNNRFVKLEVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9134; Mature: 9003
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPYFPMNYYFFSLNISYQTFVTHYSGVASHVMVTTEQGLRLQLPATRLRPFLSQIGVKG CCCCCCCCEEEEEEEECHHHEEECCCCCCEEEEEECCCCCEEECCHHHHHHHHHHCCCCC RFRLTTDQNNRFVKLEVL EEEEEECCCCCEEEEEEC >Mature Secondary Structure PPYFPMNYYFFSLNISYQTFVTHYSGVASHVMVTTEQGLRLQLPATRLRPFLSQIGVKG CCCCCCCEEEEEEEECHHHEEECCCCCCEEEEEECCCCCEEECCHHHHHHHHHHCCCCC RFRLTTDQNNRFVKLEVL EEEEEECCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA