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The map label for this gene is gdhB [H]

Identifier: 147674485

GI number: 147674485

Start: 1155512

End: 1156108

Strand: Reverse

Name: gdhB [H]

Synonym: VC0395_A1100

Alternate gene names: 147674485

Gene position: 1156108-1155512 (Counterclockwise)

Preceding gene: 147675090

Following gene: 147673706

Centisome position: 38.23

GC content: 44.89

Gene sequence:

>597_bases
ATGACTGCGCGTGAAACTTTGATGCCAGTTTTGCTTGAAAAAGTTTATCAACTGATTCAAGACAAACTAGAGCTTGCTCA
ACAACCCTTAGTGACTCAACTTGGACAACACCTGTTCAGTAACATTTCACAAGACGACCTAGTGGAGCGTAACGAATCGG
ATCTTTATGGTGCAGTGCTCAGTTTATGGCACCACATCAATGAGAAAAAAGCCGATGAACGCTCAGTACGAGTATTTAAC
CCAACGGTAAGTCGCCAAGGTTGGCAATCGACCCACACCATTGTTGAGATTGTTCTACCAGATAGTCCCTTTCTGGTTGA
TTCAATCAAAATGGCATTAAGCCGCCTAGGATTGGCATCGCACTTAATGCTCAACGGACCTGCTCATATTGCACGTCACG
ACGATGGCTCGATCAAAAGCATTAATCAAGGAGAAGGGCAACTGACCTCAATGTTCCACATTGAAGTCGATCGCCTAAGC
AGCAAGGAAGAGATGACAGAGCTGAAAAACGAATTGCTGGATATCCTGCATGACACCGCTCTGGTTGTGAAAGATTGGAA
ACCGATGGCGACCAAGCTTGAACAAGTGATCAATTAG

Upstream 100 bases:

>100_bases
ATAAATAAAACTCTTACAATACGCCCTGCATTACCATCAGTAAGCGCTATGCTTACTGCACACCCCCTACAAAAATAAGA
ATCAAATTCTGGAGTCGACC

Downstream 100 bases:

>100_bases
CTGGAAGCGGATAAAAAACAGATCCCTGTAGAAGCCGAACGCCTACAAGAAACTATTCAGTTTTTACGCTGGCTAGGTAA
CCATAACTTCACCTTTATGG

Product: NAD-specific glutamate dehydrogenase

Products: NA

Alternate protein names: NAD-GDH; NAD(+)-dependent glutamate dehydrogenase [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVLSLWHHINEKKADERSVRVFN
PTVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLASHLMLNGPAHIARHDDGSIKSINQGEGQLTSMFHIEVDRLS
SKEEMTELKNELLDILHDTALVVKDWKPMATKLEQVIN

Sequences:

>Translated_198_residues
MTARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVLSLWHHINEKKADERSVRVFN
PTVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLASHLMLNGPAHIARHDDGSIKSINQGEGQLTSMFHIEVDRLS
SKEEMTELKNELLDILHDTALVVKDWKPMATKLEQVIN
>Mature_197_residues
TARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVLSLWHHINEKKADERSVRVFNP
TVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLASHLMLNGPAHIARHDDGSIKSINQGEGQLTSMFHIEVDRLSS
KEEMTELKNELLDILHDTALVVKDWKPMATKLEQVIN

Specific function: Involved in arginine catabolism by converting L- glutamate, into 2-oxoglutarate, which is then channeled into the tricarboxylic acid cycle. Can also utilize other amino acids of the glutamate family [H]

COG id: COG2902

COG function: function code E; NAD-specific glutamate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Glu/Leu/Phe/Val dehydrogenases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR007780 [H]

Pfam domain/function: PF05088 Bac_GDH [H]

EC number: =1.4.1.2 [H]

Molecular weight: Translated: 22452; Mature: 22321

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH
SLWHHINEKKADERSVRVFNPTVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLAS
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHH
HLMLNGPAHIARHDDGSIKSINQGEGQLTSMFHIEVDRLSSKEEMTELKNELLDILHDTA
HHHHCCCHHHEECCCCCCCCCCCCCCHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHH
LVVKDWKPMATKLEQVIN
HHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
TARETLMPVLLEKVYQLIQDKLELAQQPLVTQLGQHLFSNISQDDLVERNESDLYGAVL
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHH
SLWHHINEKKADERSVRVFNPTVSRQGWQSTHTIVEIVLPDSPFLVDSIKMALSRLGLAS
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHH
HLMLNGPAHIARHDDGSIKSINQGEGQLTSMFHIEVDRLSSKEEMTELKNELLDILHDTA
HHHHCCCHHHEECCCCCCCCCCCCCCHHHHHHEEHHHHCCCHHHHHHHHHHHHHHHHHHH
LVVKDWKPMATKLEQVIN
HHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11133942; 10984043; 9286980 [H]