Click here to switch to the map view.

The map label for this gene is viuA

Identifier: 147675048

GI number: 147675048

Start: 1915366

End: 1917429

Strand: Reverse

Name: viuA

Synonym: VC0395_A1803

Alternate gene names: 147675048

Gene position: 1917429-1915366 (Counterclockwise)

Preceding gene: 147673624

Following gene: 147675600

Centisome position: 63.41

GC content: 46.27

Gene sequence:

>2064_bases
ATGGCAGTTTTATGCCCAGCGCGAGTCAGTGTTGCAGAGAACAAAAAGTTTAAATTGCACACCTTGTCGGCGATGATGAT
GGGGCTTTTCACGGGCAGTTTTGCCTATGCGGAAACGCAGAATACGAGTAATCAAGAGCAAGAAATGCCCGTGTTGGTCG
TGATTGGCGAAAAAACACAACGCAGCATTTATGAGACGAGCGCGAGTGTCGAAGTGTTTGATCAAGACACGATTGAGAGA
ACACCCGGCGCAACAGAGATTGATGATCTCCTACAACTGATCCCAAACCTTGTCGATTCGGGTCAAAGCAACAATATGCC
CACGATTCGAGGTATCGATGGCTCGGGGCCTTCCGTTGGGGGCTTGGCCAGTTTTGCTGGCACATCACCTCGCTTAAATA
TGTCGATTGACGGTCGTTCGCTGACTTATTCTGAAATTGCTTTTGGCCCTCGTTCACTCTGGGATATGCAGCAAGTGGAG
ATCTATTTAGGGCCACAGAGCTACATTCAAGGGCGAAATACCTCGGCGGGCGCGATTGTGATGAAGTCTAACGACCCTAC
TCATCATTTTGAAAGTGCGGTAAAAGCAGGTATTGGCGAAAGCGATTATTCGCAAACAGCGGGTATGATCTCTGCACCTA
TTATTCAAGATGAGTTGGCATTTCGTTTGAGTTTTGATCAGCAGAAGCGGGATAGTTTTGTCGATCTTGCTGCTTTTGAA
CCCGCGGGCGATCCTAAAAAAATCGAGATGAATTCGGTGCGCGGTAAGCTGCTGTACGAACCTTCCGCACTGGATGGTTT
TAAAACCACGTTAACGCTCTCTCATATGGATTCTCGTGGGCCACAAACAGAAAACATTAATGTGGCGGGTAACGAAGCCT
TCCGACCGGTTTATGAGACAGCCTCGTTCACGACGGCGTGGGATATTATCTGGCATCTCAACGACCTCTTCACTTTTGAA
AACAATCTGGTGTATGCCGATTTCAGCTATGACCGTTATACCAATCCCAATAGCCGAGGGGATTTCAATACCGATGGTAA
AGAATTCCATATCGAACCGTTATTACGCTATATCGCACTGGATGGTAGCGTGAATACGCTGATTGGGGCGCGTTACTACC
AATCTTCACAGGATGATATGTACATTGATGCGGCCAGTGCATATCCGATGGATGGTCGCACTAAAGCCAAATCCGTTTTT
GCGGAAGTCACTTATGCGTTAACGCCTTCTATCAATGTGAATTTGGCTGGCCGATTTGAAAGAGAGCAGGTTAAGCGAAA
CGTCTCGCACCCAAGATACAAGCTTGATTACGATGAAACATCCAGCGTATTTTTGCCTAAGCTCGATGTGGCATATACAC
CAGTGCAAGGGCAGACCTATGGGATTAAAGCGGCTAAAGGTTACAATGCGAGTGGGGCAGGACTAGCCTTTAACTCGATG
CAATTTACAGGTTTTAGGCCCTACGAGTTTGAACAGGAATCGATTTGGAACTATGAGTTTTACACCCGTCACCGTTTCAG
CCATTCTGTCGAAGTGTTGACTAACCTTTTCTATAACGATTTTGACAGTATGCAGATGACGCAAACCACATCCAGTGGTG
ATGTGTTTATCGCTAACCTTGATGAAGCGAGCACTTACGGCGCTGAAATCGGATCACGTTGGTATGCGACCTCTTCACTC
GAACTTTTTGCCAACCTAGGGCTTTTGAAAACCGAGTTCAAAGAAACCACCGGAAACACCAAAGAGCTGCCTCGAGCACC
GAAAATGTCAGCCAATGTTGGTCTGCTTTATGATTTTGGCCAAGGGTTTGAGTTCAGTAGTAATGCGGCTTATACCGGAA
GCTATTTCTCGGAGAGTGGCAATTCAGAAAAATTTGCGATTGACTCATATTGGGTTGCCAATGCTCAGTTAGCCTATGTT
TTTGAGCATGGACGAGCAACCTTGTATGCCACTAACTTATTGGATTCTGATAAAACAACGCTTTATCTCTCAACCAATAA
TACGCTTGACCAACTTAAACAGCAGCCTCGCATGATTGGTGCATCGGTGCAGTTGAATTTCTAA

Upstream 100 bases:

>100_bases
TTCGTTCTGGTATTTGTCATTGAAAACGAAGGAAGCCTCTCATCTCCATACTGGCCTGAGCGCAGTGTAGTGGTTAATTT
AGAGTTAAGGAGAAATTCAA

Downstream 100 bases:

>100_bases
ATGATATTTCAAATGGACTGAAACAAAACAACGCCTCTAAGTCAGCTGAGAGGCGTTTTTTTATGTTCGCATTTAAGTCT
TGAGCTGAGCTCTCGAGGTT

Product: ferric vibriobactin receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 687; Mature: 686

Protein sequence:

>687_residues
MAVLCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDTIER
TPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVE
IYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFE
PAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNEAFRPVYETASFTTAWDIIWHLNDLFTFE
NNLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIALDGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVF
AEVTYALTPSINVNLAGRFEREQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSM
QFTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANLDEASTYGAEIGSRWYATSSL
ELFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYV
FEHGRATLYATNLLDSDKTTLYLSTNNTLDQLKQQPRMIGASVQLNF

Sequences:

>Translated_687_residues
MAVLCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDTIER
TPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVE
IYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFE
PAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNEAFRPVYETASFTTAWDIIWHLNDLFTFE
NNLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIALDGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVF
AEVTYALTPSINVNLAGRFEREQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSM
QFTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANLDEASTYGAEIGSRWYATSSL
ELFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYV
FEHGRATLYATNLLDSDKTTLYLSTNNTLDQLKQQPRMIGASVQLNF
>Mature_686_residues
AVLCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDTIERT
PGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEI
YLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFEP
AGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNEAFRPVYETASFTTAWDIIWHLNDLFTFEN
NLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIALDGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVFA
EVTYALTPSINVNLAGRFEREQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSMQ
FTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANLDEASTYGAEIGSRWYATSSLE
LFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVF
EHGRATLYATNLLDSDKTTLYLSTNNTLDQLKQQPRMIGASVQLNF

Specific function: Receptor for ferric vibriobactin

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VIUA_VIBC3 (A5F661)

Other databases:

- EMBL:   AF030977
- EMBL:   CP000627
- EMBL:   CP001235
- PIR:   A41905
- ProteinModelPortal:   A5F661
- STRING:   A5F661
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A1803
- eggNOG:   COG1629
- HOGENOM:   HBG677532
- OMA:   FELSANA
- ProtClustDB:   CLSK874714
- BioCyc:   VCHO345073:VC0395_A1803-MONOMER
- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105
- Gene3D:   G3DSA:2.170.130.10
- Gene3D:   G3DSA:2.40.170.20
- TIGRFAMs:   TIGR01783

Pfam domain/function: PF07715 Plug

EC number: NA

Molecular weight: Translated: 76414; Mature: 76282

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQ
CEEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCEEEEECCCHH
RSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVG
HHHHHCCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
GLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIV
CHHHHCCCCCEEEEEECCCEEEHHHHCCCCHHHCCCEEEEEEECCHHHHCCCCCCCCEEE
MKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFE
ECCCCCCHHHHHHHHHCCCCCCHHHHCCCEECCEECCCEEEEEECCHHHCCCEEEEEEEC
PAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNEAFRPVYET
CCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHC
ASFTTAWDIIWHLNDLFTFENNLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIAL
CCCCCHHHHEEEHHHEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCC
DGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVFAEVTYALTPSINVNLAGRFE
CCCHHHHEEEHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHEEEEECCCEEEEEECCCC
REQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSM
HHHHHHCCCCCEEEECCCCCCCEEEECCCEEEECCCCCEEEEEEECCCCCCCCCEEEECE
QFTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANL
EECCCCCCCCCHHHCCCEEHEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEC
DEASTYGAEIGSRWYATSSLELFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFG
CCCHHHHHHHCCCEEECCHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECC
QGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEHGRATLYATNLLDSDKTT
CCCCCCCCCEEECCHHHCCCCCCEEEEEEEEEECCEEEEEEECCCEEEEEEECCCCCCEE
LYLSTNNTLDQLKQQPRMIGASVQLNF
EEEECCCHHHHHHHCCHHCCCEEEECC
>Mature Secondary Structure 
AVLCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQ
EEECCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCHHHCCCEEEEECCCHH
RSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVG
HHHHHCCCCEEEECCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
GLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIV
CHHHHCCCCCEEEEEECCCEEEHHHHCCCCHHHCCCEEEEEEECCHHHHCCCCCCCCEEE
MKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFE
ECCCCCCHHHHHHHHHCCCCCCHHHHCCCEECCEECCCEEEEEECCHHHCCCEEEEEEEC
PAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNEAFRPVYET
CCCCCCEEEECCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCHHHHC
ASFTTAWDIIWHLNDLFTFENNLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIAL
CCCCCHHHHEEEHHHEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCC
DGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVFAEVTYALTPSINVNLAGRFE
CCCHHHHEEEHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHEEEEECCCEEEEEECCCC
REQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSM
HHHHHHCCCCCEEEECCCCCCCEEEECCCEEEECCCCCEEEEEEECCCCCCCCCEEEECE
QFTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANL
EECCCCCCCCCHHHCCCEEHEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEC
DEASTYGAEIGSRWYATSSLELFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFG
CCCHHHHHHHCCCEEECCHHHHHHCCCHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECC
QGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEHGRATLYATNLLDSDKTT
CCCCCCCCCEEECCHHHCCCCCCEEEEEEEEEECCEEEEEEECCCEEEEEEECCCCCCEE
LYLSTNNTLDQLKQQPRMIGASVQLNF
EEEECCCHHHHHHHCCHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381