| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147675030
Identifier: 147675030
GI number: 147675030
Start: 1463973
End: 1465385
Strand: Reverse
Name: 147675030
Synonym: VC0395_A1365
Alternate gene names: NA
Gene position: 1465385-1463973 (Counterclockwise)
Preceding gene: 147674628
Following gene: 147675278
Centisome position: 48.46
GC content: 44.94
Gene sequence:
>1413_bases ATGGCGGTTGTTGTTGCCAGTTGCACACTGGATAAGCTGTTTTCTAATGAGTCGATTTTAGCTTCTGACGGTAAAGTTCA AAAAAACGTTCACGGGATGCTTGCCATCCCTGAATATCAGCGTCCCTATCGCTGGAATGAAGAGCAAATCACCCGTCTAT TGAAAGATTTCAAGCTTCATCAGCAAGAGTTAAATGACAAGCTTGAAACAGAGCATTGCCCATTCTATTTAGGTAGTGTG ATTCTGCATCAGCAGGGTGACAAGCTGAATATCATCGATGGTCAGCAACGTTTGACCACAATGGCGTTGATGTCTTATCT AGCAAATAAACATGTCGATCTTAAACTAGTTTACGAATCGCCTGAGAGTCAGCAGCAAATCAAACACAATCTTGGTTGGT TGTATAGAAATGAAGCCTCTTTGGCTGATATCGATTTTGCTCAAATCAATATTACCTTGGTGGTGACAGACAGTGAAGAT GAAGCCTACCGCTTTTTTGAAACCCAAAACACGGGCGGCGTGCGATTAGCCGGGCCAGATATTATTAAAGCGCACCATCT TAGAGCGGTTGATGAGAAAGATAAGTCTGCGGTAAACACCTTTGCCACACGTTGGGAAGCGCTGGGGGATTTAAACCCCG TGGTCGATATTTTGCTACGTGGTCGCTATTGGCAATATCTGAACTTCCGAGACTACCCGCTGCACAACCAAACTCAGCAA GTGCGAAATAGTATTGTCACCGAACTGGCAGAGCACACAGGCAAAGGCGACGATATTGCCTTTGGTAGAATTGCTCGTAC TTATATGCCCAACGGTGGAGAGAGCTTGGCACAGCCTCAAGTTGGCTATGAATTGCGCCAGCCGCTAAACAGTGGCGCTA ATACCATTCACTATTTGCAATATTTTGAGCAACTGCGCCAAACCTATTTGCTGAAAAACTCAACGCAAGGTGAGCTTGCA GGCTTTTACGAGTTCTATCAAAAGCTGGTGTGTAAACTTGATGGCTGCGGCTATCTCAAACAGCTTTATGACGCTTGCCT GCTGCTCTACATCAGTCAGCATGGGCAGCAAAGCCTAGAGGTAGCAGCGAAAAAACTTTTCCGCGTGGTTTACTCTCGAC GTGTAGAGAACCAAAAAGCAGTAAAAGAGAAATCGGTTCCTGCTTTTGTCAAAGAAACCCCAGTGCTGGATTGGATTGCG ATGAGCTATACCCCAGAGCAGTGTTTCGCACAGCTTGATGGTTTTAAGCTGTCGGTAGACAAGAGTGGCTTTGATAAAAA CAGCGTTAAAAAACGTTTCGTCGAAAAAGTGTCTCAATACTTTGGCCTTGATATAGACAAGCAAGATTATGCCAATCAAT TTGGCCCTGCATTTAGCCAACACATCTCTGCGTTAGGAGCAAAACATGGGTGA
Upstream 100 bases:
>100_bases AACTGTTCAGGCTGAGCAAGTAAGTAAGCTCAAAGAATACAAAACCACTCTCATCAACAGCGCTGTAACCGGCAAAATCA AAGTAACGGAGCTGGCGTAA
Downstream 100 bases:
>100_bases TCATTTATCGGTGCAAACTGAGCTTCTGACGCTTGAGAAAATCTACACCGACAACTACCAGTTCTCTATTCCCAGCTATC AACGTCCTTATGTCTGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MAVVVASCTLDKLFSNESILASDGKVQKNVHGMLAIPEYQRPYRWNEEQITRLLKDFKLHQQELNDKLETEHCPFYLGSV ILHQQGDKLNIIDGQQRLTTMALMSYLANKHVDLKLVYESPESQQQIKHNLGWLYRNEASLADIDFAQINITLVVTDSED EAYRFFETQNTGGVRLAGPDIIKAHHLRAVDEKDKSAVNTFATRWEALGDLNPVVDILLRGRYWQYLNFRDYPLHNQTQQ VRNSIVTELAEHTGKGDDIAFGRIARTYMPNGGESLAQPQVGYELRQPLNSGANTIHYLQYFEQLRQTYLLKNSTQGELA GFYEFYQKLVCKLDGCGYLKQLYDACLLLYISQHGQQSLEVAAKKLFRVVYSRRVENQKAVKEKSVPAFVKETPVLDWIA MSYTPEQCFAQLDGFKLSVDKSGFDKNSVKKRFVEKVSQYFGLDIDKQDYANQFGPAFSQHISALGAKHG
Sequences:
>Translated_470_residues MAVVVASCTLDKLFSNESILASDGKVQKNVHGMLAIPEYQRPYRWNEEQITRLLKDFKLHQQELNDKLETEHCPFYLGSV ILHQQGDKLNIIDGQQRLTTMALMSYLANKHVDLKLVYESPESQQQIKHNLGWLYRNEASLADIDFAQINITLVVTDSED EAYRFFETQNTGGVRLAGPDIIKAHHLRAVDEKDKSAVNTFATRWEALGDLNPVVDILLRGRYWQYLNFRDYPLHNQTQQ VRNSIVTELAEHTGKGDDIAFGRIARTYMPNGGESLAQPQVGYELRQPLNSGANTIHYLQYFEQLRQTYLLKNSTQGELA GFYEFYQKLVCKLDGCGYLKQLYDACLLLYISQHGQQSLEVAAKKLFRVVYSRRVENQKAVKEKSVPAFVKETPVLDWIA MSYTPEQCFAQLDGFKLSVDKSGFDKNSVKKRFVEKVSQYFGLDIDKQDYANQFGPAFSQHISALGAKHG >Mature_469_residues AVVVASCTLDKLFSNESILASDGKVQKNVHGMLAIPEYQRPYRWNEEQITRLLKDFKLHQQELNDKLETEHCPFYLGSVI LHQQGDKLNIIDGQQRLTTMALMSYLANKHVDLKLVYESPESQQQIKHNLGWLYRNEASLADIDFAQINITLVVTDSEDE AYRFFETQNTGGVRLAGPDIIKAHHLRAVDEKDKSAVNTFATRWEALGDLNPVVDILLRGRYWQYLNFRDYPLHNQTQQV RNSIVTELAEHTGKGDDIAFGRIARTYMPNGGESLAQPQVGYELRQPLNSGANTIHYLQYFEQLRQTYLLKNSTQGELAG FYEFYQKLVCKLDGCGYLKQLYDACLLLYISQHGQQSLEVAAKKLFRVVYSRRVENQKAVKEKSVPAFVKETPVLDWIAM SYTPEQCFAQLDGFKLSVDKSGFDKNSVKKRFVEKVSQYFGLDIDKQDYANQFGPAFSQHISALGAKHG
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53733; Mature: 53601
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVVVASCTLDKLFSNESILASDGKVQKNVHGMLAIPEYQRPYRWNEEQITRLLKDFKLH CEEEEEECHHHHHHCCCCEEECCCCHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH QQELNDKLETEHCPFYLGSVILHQQGDKLNIIDGQQRLTTMALMSYLANKHVDLKLVYES HHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECC PESQQQIKHNLGWLYRNEASLADIDFAQINITLVVTDSEDEAYRFFETQNTGGVRLAGPD CCHHHHHHHHCCEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCEEECCCC IIKAHHLRAVDEKDKSAVNTFATRWEALGDLNPVVDILLRGRYWQYLNFRDYPLHNQTQQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHH VRNSIVTELAEHTGKGDDIAFGRIARTYMPNGGESLAQPQVGYELRQPLNSGANTIHYLQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHCCCCHHHHHHH YFEQLRQTYLLKNSTQGELAGFYEFYQKLVCKLDGCGYLKQLYDACLLLYISQHGQQSLE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH VAAKKLFRVVYSRRVENQKAVKEKSVPAFVKETPVLDWIAMSYTPEQCFAQLDGFKLSVD HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHHHCCEEEEEC KSGFDKNSVKKRFVEKVSQYFGLDIDKQDYANQFGPAFSQHISALGAKHG CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure AVVVASCTLDKLFSNESILASDGKVQKNVHGMLAIPEYQRPYRWNEEQITRLLKDFKLH EEEEEECHHHHHHCCCCEEECCCCHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHH QQELNDKLETEHCPFYLGSVILHQQGDKLNIIDGQQRLTTMALMSYLANKHVDLKLVYES HHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECC PESQQQIKHNLGWLYRNEASLADIDFAQINITLVVTDSEDEAYRFFETQNTGGVRLAGPD CCHHHHHHHHCCEEEECCCCCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCEEECCCC IIKAHHLRAVDEKDKSAVNTFATRWEALGDLNPVVDILLRGRYWQYLNFRDYPLHNQTQQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCCCCCCHHHH VRNSIVTELAEHTGKGDDIAFGRIARTYMPNGGESLAQPQVGYELRQPLNSGANTIHYLQ HHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHCCCCHHHHHHH YFEQLRQTYLLKNSTQGELAGFYEFYQKLVCKLDGCGYLKQLYDACLLLYISQHGQQSLE HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH VAAKKLFRVVYSRRVENQKAVKEKSVPAFVKETPVLDWIAMSYTPEQCFAQLDGFKLSVD HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHCCCHHHHHHHHCCEEEEEC KSGFDKNSVKKRFVEKVSQYFGLDIDKQDYANQFGPAFSQHISALGAKHG CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA