| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is htpG
Identifier: 147674825
GI number: 147674825
Start: 538977
End: 540884
Strand: Direct
Name: htpG
Synonym: VC0395_A0506
Alternate gene names: 147674825
Gene position: 538977-540884 (Clockwise)
Preceding gene: 147674558
Following gene: 147673458
Centisome position: 17.82
GC content: 45.75
Gene sequence:
>1908_bases ATGAGCGAGACTGCAACCACTAATAAAGAAACGCGTGGTTTTCAATCGGAAGTTAAACAACTGCTGCACCTGATGATTCA CTCTTTGTACTCCAACAAAGAAATTTTCCTGCGTGAGTTGATTTCTAACGCCTCCGATGCCGTTGATAAGTTGCGTTTTC AAGCGCTTTCTCATCCTGATCTCTATCAGGGCGACGCTGAATTAGGCGTAAAACTCTCTTTTGATAAAGACAAAAATACG TTGACCATTTCGGATAACGGGATCGGTATGACCCGTGATGAAGTGATCGAAAACTTAGGTACGATTGCTAAATCGGGTAC GGCTGAATTCTTCTCAAAACTTTCTCAAGAGCAGTCTAAAAACTCGCAGCTCATTGGTCAGTTTGGGGTGGGTTTTTACT CGGCTTTCATCGTGGCGGATGCGGTGACGGTGCGGACTCGCGCTGCAGGTAGTGCACCAGCAGATGCAGTACAGTGGTAC TCAAAAGGTGAGGGCGAGTACACGGTTGAAACTATCAATAAAGAGTCTCGTGGTACAGACATCATTTTGCATCTGCGTGA AGAAGGTAAAGAGTTTTTGTCCGAATGGCGTTTGCGCGATGTGATTTCCAAATACTCTGATCACATCGGTATTCCTGTCT ATATCCAAACCTCAGTGATGGATGAAGAAGGGAAAGCGACAGAAGAAACCAAATGGGAGCAGATCAACAAGGCTCAAGCT CTGTGGACGCGTGCTAAATCGGAAGTTACCGATGAGGAATATAAAGAGTTCTACAAGCATGTATCACACGATTTTGCTGA TCCACTCGTGTGGAGTCATAACAAAGTCGAAGGTAAAAATGACTACACCAGCTTACTTTACATTCCTGCTAAAGCGCCTT GGGATCTGTTCAATCGTGAACATAAGCATGGTTTAAAACTGTATGTGCAACGCGTCTTTATTATGGATGATGCGGCGCAA TTCATGCCTTCTTATCTGAGATTCGTACGTGGTTTGATTGACTCAAACGATCTGCCGCTCAACGTATCGCGTGAAATTCT GCAAGATAACAAGATCACTCAGTCACTGCGCCAAGCTTGTACTAAGCGCGTATTGACTATGCTTGAGCGCATGGCGAGCA ATGATGCTGACAATTACCAGAAATTCTGGAAAGAGTTTGGCTTGGTGATGAAAGAAGGTCCGGCAGAAGATTTTGCTAAC CGCGAGAAAATCGCTAGCTTGCTGCGTTTTGCCTCTACTCATATCGATTCGGCAGAGCAAACCATCAGCCTTGCTTCTTA TGTCGAGCGCATGAAAGAAGGTCAAGACAAGATCTACTATCTGACGGCAGACAGCTATACCGCTGCGAAAAACAGCCCAC ACTTGGAGCAGTTTAAGTCAAAAGGGATTGAAGTCATTCTGATGTTTGATCGCATTGACGAATGGTTGATGAATTATTTG CCAGAGTTTGAGGGTAAAGCGTTCCAGTCCATCACCAAAGCAGGCTTGGATCTCAGCCAGTTCGAAGATGAAGCCGAAAA AGAGAAACATAAAGAGACGGAAGAGCAATTTAAGTCTGTGGTTGAACGCCTCAAAGGCTATTTAGGTAGCCGAGTGAAAG AGGTTCGTACCACATTCAAACTGGCTAACACACCAGCAGTCGTGGTGACCGATGATTATGAAATGGGTACCCAAATGGCG AAACTATTGGCCGCAGCCGGCCAGCCTGTGCCTGAAGTGAAGTACATCCTTGAAGTTAACCCTGAACATGCTTTGGTAAA ACGCATGGCGGATGAAGCGGATGAGCAAACTTTTGGCCGTTGGGCGGAAGTGCTACTGGGTCAAGCTATGCTTGCCGAAC GTGGCTCGATGGAAGATCCATCACAATTCTTAGGTGCAGTAAACCAACTGCTTGCACCTAGCCACTAA
Upstream 100 bases:
>100_bases TTGAATTTACATTTTTTGTCCATATCTCACTTGCACATCAAGGTAATTCCATTGAGTCTCAATGGATCAATTGTTTGAAA CAGAAGTAAACGGAGCGATT
Downstream 100 bases:
>100_bases GTCCTTGCTATCGCATCTTAAGCCCGCTTCGGCGGGCTTTTTTCTGCCTTTGAGCTATCGAAGGACGGATTAGTGACTAA ACAGGTGAATGGCTGTTTTG
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 635; Mature: 634
Protein sequence:
>635_residues MSETATTNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNT LTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSKNSQLIGQFGVGFYSAFIVADAVTVRTRAAGSAPADAVQWY SKGEGEYTVETINKESRGTDIILHLREEGKEFLSEWRLRDVISKYSDHIGIPVYIQTSVMDEEGKATEETKWEQINKAQA LWTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPWDLFNREHKHGLKLYVQRVFIMDDAAQ FMPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQACTKRVLTMLERMASNDADNYQKFWKEFGLVMKEGPAEDFAN REKIASLLRFASTHIDSAEQTISLASYVERMKEGQDKIYYLTADSYTAAKNSPHLEQFKSKGIEVILMFDRIDEWLMNYL PEFEGKAFQSITKAGLDLSQFEDEAEKEKHKETEEQFKSVVERLKGYLGSRVKEVRTTFKLANTPAVVVTDDYEMGTQMA KLLAAAGQPVPEVKYILEVNPEHALVKRMADEADEQTFGRWAEVLLGQAMLAERGSMEDPSQFLGAVNQLLAPSH
Sequences:
>Translated_635_residues MSETATTNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNT LTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSKNSQLIGQFGVGFYSAFIVADAVTVRTRAAGSAPADAVQWY SKGEGEYTVETINKESRGTDIILHLREEGKEFLSEWRLRDVISKYSDHIGIPVYIQTSVMDEEGKATEETKWEQINKAQA LWTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPWDLFNREHKHGLKLYVQRVFIMDDAAQ FMPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQACTKRVLTMLERMASNDADNYQKFWKEFGLVMKEGPAEDFAN REKIASLLRFASTHIDSAEQTISLASYVERMKEGQDKIYYLTADSYTAAKNSPHLEQFKSKGIEVILMFDRIDEWLMNYL PEFEGKAFQSITKAGLDLSQFEDEAEKEKHKETEEQFKSVVERLKGYLGSRVKEVRTTFKLANTPAVVVTDDYEMGTQMA KLLAAAGQPVPEVKYILEVNPEHALVKRMADEADEQTFGRWAEVLLGQAMLAERGSMEDPSQFLGAVNQLLAPSH >Mature_634_residues SETATTNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPDLYQGDAELGVKLSFDKDKNTL TISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSKNSQLIGQFGVGFYSAFIVADAVTVRTRAAGSAPADAVQWYS KGEGEYTVETINKESRGTDIILHLREEGKEFLSEWRLRDVISKYSDHIGIPVYIQTSVMDEEGKATEETKWEQINKAQAL WTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPWDLFNREHKHGLKLYVQRVFIMDDAAQF MPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQACTKRVLTMLERMASNDADNYQKFWKEFGLVMKEGPAEDFANR EKIASLLRFASTHIDSAEQTISLASYVERMKEGQDKIYYLTADSYTAAKNSPHLEQFKSKGIEVILMFDRIDEWLMNYLP EFEGKAFQSITKAGLDLSQFEDEAEKEKHKETEEQFKSVVERLKGYLGSRVKEVRTTFKLANTPAVVVTDDYEMGTQMAK LLAAAGQPVPEVKYILEVNPEHALVKRMADEADEQTFGRWAEVLLGQAMLAERGSMEDPSQFLGAVNQLLAPSH
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI4507677, Length=683, Percent_Identity=36.6032210834553, Blast_Score=426, Evalue=1e-119, Organism=Homo sapiens, GI20149594, Length=670, Percent_Identity=37.3134328358209, Blast_Score=404, Evalue=1e-112, Organism=Homo sapiens, GI155722983, Length=640, Percent_Identity=37.65625, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI154146191, Length=410, Percent_Identity=37.5609756097561, Blast_Score=266, Evalue=5e-71, Organism=Homo sapiens, GI153792590, Length=410, Percent_Identity=37.5609756097561, Blast_Score=264, Evalue=2e-70, Organism=Escherichia coli, GI1786679, Length=624, Percent_Identity=69.7115384615385, Blast_Score=915, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=672, Percent_Identity=37.202380952381, Blast_Score=448, Evalue=1e-126, Organism=Caenorhabditis elegans, GI17542208, Length=673, Percent_Identity=37.592867756315, Blast_Score=424, Evalue=1e-119, Organism=Caenorhabditis elegans, GI115535205, Length=643, Percent_Identity=34.0590979782271, Blast_Score=330, Evalue=1e-90, Organism=Caenorhabditis elegans, GI115535167, Length=427, Percent_Identity=36.2997658079625, Blast_Score=267, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6323840, Length=679, Percent_Identity=37.260677466863, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6325016, Length=209, Percent_Identity=44.0191387559809, Blast_Score=174, Evalue=4e-44, Organism=Drosophila melanogaster, GI17647529, Length=641, Percent_Identity=37.9095163806552, Blast_Score=447, Evalue=1e-126, Organism=Drosophila melanogaster, GI21357739, Length=681, Percent_Identity=38.1791483113069, Blast_Score=418, Evalue=1e-117, Organism=Drosophila melanogaster, GI24586016, Length=651, Percent_Identity=33.026113671275, Blast_Score=348, Evalue=8e-96,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_VIBC3 (A5F2T9)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F2T9 - SMR: A5F2T9 - STRING: A5F2T9 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0506 - eggNOG: COG0326 - HOGENOM: HBG631012 - OMA: AIYYITA - ProtClustDB: PRK05218 - BioCyc: VCHO345073:VC0395_A0506-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 72198; Mature: 72067
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETATTNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPD CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC LYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSK CCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC NSQLIGQFGVGFYSAFIVADAVTVRTRAAGSAPADAVQWYSKGEGEYTVETINKESRGTD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCE IILHLREEGKEFLSEWRLRDVISKYSDHIGIPVYIQTSVMDEEGKATEETKWEQINKAQA EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHH LWTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPWDLFNRE HHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCCHHHHCCH HKHGLKLYVQRVFIMDDAAQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHH TKRVLTMLERMASNDADNYQKFWKEFGLVMKEGPAEDFANREKIASLLRFASTHIDSAEQ HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCHHHCCHHHHHHHHHHHHHHCCHHHH TISLASYVERMKEGQDKIYYLTADSYTAAKNSPHLEQFKSKGIEVILMFDRIDEWLMNYL HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHC PEFEGKAFQSITKAGLDLSQFEDEAEKEKHKETEEQFKSVVERLKGYLGSRVKEVRTTFK CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANTPAVVVTDDYEMGTQMAKLLAAAGQPVPEVKYILEVNPEHALVKRMADEADEQTFGR CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH WAEVLLGQAMLAERGSMEDPSQFLGAVNQLLAPSH HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SETATTNKETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAVDKLRFQALSHPD CCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC LYQGDAELGVKLSFDKDKNTLTISDNGIGMTRDEVIENLGTIAKSGTAEFFSKLSQEQSK CCCCCCCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC NSQLIGQFGVGFYSAFIVADAVTVRTRAAGSAPADAVQWYSKGEGEYTVETINKESRGTD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCE IILHLREEGKEFLSEWRLRDVISKYSDHIGIPVYIQTSVMDEEGKATEETKWEQINKAQA EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHH LWTRAKSEVTDEEYKEFYKHVSHDFADPLVWSHNKVEGKNDYTSLLYIPAKAPWDLFNRE HHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEECCCCCHHHHCCH HKHGLKLYVQRVFIMDDAAQFMPSYLRFVRGLIDSNDLPLNVSREILQDNKITQSLRQAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHH TKRVLTMLERMASNDADNYQKFWKEFGLVMKEGPAEDFANREKIASLLRFASTHIDSAEQ HHHHHHHHHHHHCCCCHHHHHHHHHHCCHHCCCCCHHHCCHHHHHHHHHHHHHHCCHHHH TISLASYVERMKEGQDKIYYLTADSYTAAKNSPHLEQFKSKGIEVILMFDRIDEWLMNYL HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHCCCEEEEEHHHHHHHHHHHC PEFEGKAFQSITKAGLDLSQFEDEAEKEKHKETEEQFKSVVERLKGYLGSRVKEVRTTFK CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LANTPAVVVTDDYEMGTQMAKLLAAAGQPVPEVKYILEVNPEHALVKRMADEADEQTFGR CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH WAEVLLGQAMLAERGSMEDPSQFLGAVNQLLAPSH HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA