| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is oadA-2 [H]
Identifier: 147674719
GI number: 147674719
Start: 340095
End: 341912
Strand: Reverse
Name: oadA-2 [H]
Synonym: VC0395_A0320
Alternate gene names: 147674719
Gene position: 341912-340095 (Counterclockwise)
Preceding gene: 147673526
Following gene: 147673792
Centisome position: 11.31
GC content: 53.19
Gene sequence:
>1818_bases GTGAAGGAGAAACCACAGATGACTCAGGCGATCAAACGCGTTGGTGTTACGGATGTCGTATTGCGCGATGCTCACCAATC TCTTTTTGCCACCCGTTTACGAATTGACGACATGCTGCCGATTGCGCAGCAATTAGATCAGATCGGTTATTGGTCTTTGG AATGTTGGGGAGGCGCGACCTTTGACAGCTGCATCCGCTTTTTAGGCGAAGACCCATGGCAACGTCTACGTTTACTCAAA CAAGCCATGCCCAATACGCCACTGCAAATGCTGCTGCGCGGGCAAAACCTGCTCGGCTACCGTCACTATGCCGATGATGT GGTGGATACTTTTGTAGAGCGTGCGGTGAAAAACGGCATGGATGTATTTCGTGTCTTCGATGCGATGAACGATGTACGCA ACATGCAACAGGCGCTGCAAGCGGTGAAAAAGATGGGCGCGCATGCGCAAGGCACGCTCTGCTACACCACCAGCCCAGTA CACAATTTACAAACTTGGGTCGATGTGGCGCAGCAACTGGCGGAGCTCGGCGTCGACTCAATAGCCCTGAAAGATATGGC CGGCATTTTGACCCCGTATGCCGCTGAAGAGCTAGTGTCTACCCTGAAAAAACAAGTGGATGTCGAGCTGCATCTGCACT GCCACTCCACCGCGGGCCTTGCCGATATGACTCTGCTTAAAGCGATTGAAGCGGGCGTGGATCGGGTTGATACCGCGATT TCCAGCATGAGTGGCACTTATGGTCATCCTGCGACCGAATCACTGGTCGCTACCTTGCAAGGCACCGGCTACGACACCGG ATTGGATATCGCCAAACTCGAACAGATTGCGGCTTACTTCCGTGATGTACGCAAAAAATACCACGCCTTTGAAGGCATGA TGAAAGGCAGCGATGCGCGCATTTTGGTGGCTCAGGTTCCTGGCGGCATGCTGACCAACATGGAAAGCCAACTCAAACAA CAAAACGCGCTGGATAAACTCGATTTAGTGCTCGAAGAGATCCCACGCGTGCGTGAAGAACTCGGCTTTTTGCCTCTGGT CACCCCTACCTCACAAATTGTCGGTACACAAGCGGTGATCAACGTGGTGCTGGGTGAGCGTTACAAAACCATCACCAAGG AAACCAGCGGTGTGCTGAAAGGGGAATACGGCAAAACGCCAGCACCGGTTAACACTGAGCTGCAAGCTCGCGTGTTGGCG GGCGCAGAAGCCATTACTTGTCGCCCTGCGGATTTGATTGCCGCCGAAATGCCAACCTTGCAAGACCGCGTATTGCAGCA AGCTAAAGAGCAGCACATCACCCTCGCCGAGAATGCGATTGATGATGTACTGACCATTGCGCTGTTTGATCAGGTAGGCT GGAAGTTTTTAGCCAACCGCCATAACCCAGAAGCCTTTGAACCTGCGCCGCAAGCGATAAGTTCAGCCTGCACACCGAAA GCGCCAACAGAAAAAAGCAAAGTACAGCCAGTGGAAAGTCACGGTGTGTACACCATTACCGTCAACAACCAAAGCTATGT GGTGAAGGTGGATGAAGGCGGTGACCTGACGCATGTTGCGCCGACGGCATCAACCAACCACGCACCAGTCCCGAGTGCCG CAGAAGGTGAAAACCTCGCCGCGCCCCTTTCTGGCAACATCTGGAAAATTCATGCCTCAGCCGGTGATGAAGTGGCCGAA GGCGATGTCTTGCTGATTTTAGAAGCCATGAAGATGGAAACCGAAATCCGCGCGCCACGTGCCGGAGTGATCAGTGCGAT TGAAGTCAATGAAGGCGATGCCGTACAAGTCGGCGATGCTTTGTTGGTATTGGCGTAA
Upstream 100 bases:
>100_bases CAACAAGGCCAAAGCCAACCCAAATCAAAACCAAGGTGAATTGCTCGCGGTGCTCACGGCCGCTGTCCATCACCATAAAA CACAACAAAAACTATCTTAA
Downstream 100 bases:
>100_bases TCAGAGGCGGAAAGTATGGAAAATATTTTAGCCATGGTGCGTGATTTTGGCCTGTTCCACCTTCAGTGGGGACAGGGCAT CATGATCCTTGTTGGGTTAG
Product: oxaloacetate decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 605; Mature: 605
Protein sequence:
>605_residues MKEKPQMTQAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLK QAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPV HNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAI SSMSGTYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHAFEGMMKGSDARILVAQVPGGMLTNMESQLKQ QNALDKLDLVLEEIPRVREELGFLPLVTPTSQIVGTQAVINVVLGERYKTITKETSGVLKGEYGKTPAPVNTELQARVLA GAEAITCRPADLIAAEMPTLQDRVLQQAKEQHITLAENAIDDVLTIALFDQVGWKFLANRHNPEAFEPAPQAISSACTPK APTEKSKVQPVESHGVYTITVNNQSYVVKVDEGGDLTHVAPTASTNHAPVPSAAEGENLAAPLSGNIWKIHASAGDEVAE GDVLLILEAMKMETEIRAPRAGVISAIEVNEGDAVQVGDALLVLA
Sequences:
>Translated_605_residues MKEKPQMTQAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLK QAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPV HNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAI SSMSGTYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHAFEGMMKGSDARILVAQVPGGMLTNMESQLKQ QNALDKLDLVLEEIPRVREELGFLPLVTPTSQIVGTQAVINVVLGERYKTITKETSGVLKGEYGKTPAPVNTELQARVLA GAEAITCRPADLIAAEMPTLQDRVLQQAKEQHITLAENAIDDVLTIALFDQVGWKFLANRHNPEAFEPAPQAISSACTPK APTEKSKVQPVESHGVYTITVNNQSYVVKVDEGGDLTHVAPTASTNHAPVPSAAEGENLAAPLSGNIWKIHASAGDEVAE GDVLLILEAMKMETEIRAPRAGVISAIEVNEGDAVQVGDALLVLA >Mature_605_residues MKEKPQMTQAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQRLRLLK QAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPV HNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAI SSMSGTYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHAFEGMMKGSDARILVAQVPGGMLTNMESQLKQ QNALDKLDLVLEEIPRVREELGFLPLVTPTSQIVGTQAVINVVLGERYKTITKETSGVLKGEYGKTPAPVNTELQARVLA GAEAITCRPADLIAAEMPTLQDRVLQQAKEQHITLAENAIDDVLTIALFDQVGWKFLANRHNPEAFEPAPQAISSACTPK APTEKSKVQPVESHGVYTITVNNQSYVVKVDEGGDLTHVAPTASTNHAPVPSAAEGENLAAPLSGNIWKIHASAGDEVAE GDVLLILEAMKMETEIRAPRAGVISAIEVNEGDAVQVGDALLVLA
Specific function: Lyase and sodium transporter [H]
COG id: COG5016
COG function: function code C; Pyruvate/oxaloacetate carboxyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI106049528, Length=633, Percent_Identity=31.2796208530806, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI106049295, Length=633, Percent_Identity=31.2796208530806, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI106049292, Length=633, Percent_Identity=31.2796208530806, Blast_Score=271, Evalue=2e-72, Organism=Homo sapiens, GI109150422, Length=150, Percent_Identity=28, Blast_Score=67, Evalue=5e-11, Organism=Homo sapiens, GI109150427, Length=150, Percent_Identity=28, Blast_Score=67, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17562816, Length=624, Percent_Identity=33.8141025641026, Blast_Score=309, Evalue=3e-84, Organism=Caenorhabditis elegans, GI17510563, Length=121, Percent_Identity=32.2314049586777, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6319695, Length=620, Percent_Identity=30.3225806451613, Blast_Score=295, Evalue=1e-80, Organism=Saccharomyces cerevisiae, GI6321376, Length=620, Percent_Identity=30.1612903225806, Blast_Score=290, Evalue=4e-79, Organism=Drosophila melanogaster, GI24652212, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI24652210, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI24652214, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI19921944, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI24652216, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=3e-83, Organism=Drosophila melanogaster, GI281363050, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=4e-83, Organism=Drosophila melanogaster, GI24652224, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=4e-83, Organism=Drosophila melanogaster, GI24652222, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=4e-83, Organism=Drosophila melanogaster, GI24652220, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=4e-83, Organism=Drosophila melanogaster, GI24652218, Length=632, Percent_Identity=32.9113924050633, Blast_Score=306, Evalue=4e-83, Organism=Drosophila melanogaster, GI24582381, Length=193, Percent_Identity=27.4611398963731, Blast_Score=70, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001882 - InterPro: IPR000089 - InterPro: IPR003379 - InterPro: IPR005776 - InterPro: IPR000891 - InterPro: IPR011053 [H]
Pfam domain/function: PF00364 Biotin_lipoyl; PF00682 HMGL-like; PF02436 PYC_OADA [H]
EC number: =4.1.1.3 [H]
Molecular weight: Translated: 65840; Mature: 65840
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50991 PYR_CT ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKPQMTQAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGAT CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC FDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGM HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH DVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHH IALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAI HHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SSMSGTYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHAFEGMMKGSDAR HHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ILVAQVPGGMLTNMESQLKQQNALDKLDLVLEEIPRVREELGFLPLVTPTSQIVGTQAVI EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH NVVLGERYKTITKETSGVLKGEYGKTPAPVNTELQARVLAGAEAITCRPADLIAAEMPTL HHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHCCCHH QDRVLQQAKEQHITLAENAIDDVLTIALFDQVGWKFLANRHNPEAFEPAPQAISSACTPK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC APTEKSKVQPVESHGVYTITVNNQSYVVKVDEGGDLTHVAPTASTNHAPVPSAAEGENLA CCCCCCCCCCHHHCCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCC APLSGNIWKIHASAGDEVAEGDVLLILEAMKMETEIRAPRAGVISAIEVNEGDAVQVGDA CCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCE LLVLA EEEEC >Mature Secondary Structure MKEKPQMTQAIKRVGVTDVVLRDAHQSLFATRLRIDDMLPIAQQLDQIGYWSLECWGGAT CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC FDSCIRFLGEDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVKNGM HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH DVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHH IALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAI HHHHHHHHHHCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SSMSGTYGHPATESLVATLQGTGYDTGLDIAKLEQIAAYFRDVRKKYHAFEGMMKGSDAR HHCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE ILVAQVPGGMLTNMESQLKQQNALDKLDLVLEEIPRVREELGFLPLVTPTSQIVGTQAVI EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH NVVLGERYKTITKETSGVLKGEYGKTPAPVNTELQARVLAGAEAITCRPADLIAAEMPTL HHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHCCCHH QDRVLQQAKEQHITLAENAIDDVLTIALFDQVGWKFLANRHNPEAFEPAPQAISSACTPK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCC APTEKSKVQPVESHGVYTITVNNQSYVVKVDEGGDLTHVAPTASTNHAPVPSAAEGENLA CCCCCCCCCCHHHCCEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCC APLSGNIWKIHASAGDEVAEGDVLLILEAMKMETEIRAPRAGVISAIEVNEGDAVQVGDA CCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCE LLVLA EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2454915 [H]