| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674536
Identifier: 147674536
GI number: 147674536
Start: 1392041
End: 1392727
Strand: Reverse
Name: 147674536
Synonym: VC0395_A1311
Alternate gene names: NA
Gene position: 1392727-1392041 (Counterclockwise)
Preceding gene: 147675480
Following gene: 147673780
Centisome position: 46.05
GC content: 49.49
Gene sequence:
>687_bases ATGCTTTATTCTCTGATTTCCGTATTCGCACCTATGTTATTGGGCGCGCAAATCATTTTGACACTGGTGCTGGTCAAGGG GGAAATTTGCCCCGGACAGCGTGGTCGTATCCACAAAGTATTGCCTGCGTTAGCGGTGCTCTGGTTGGCCGTGGCGTCGA TCAAAATTGAAGCGTTTCTGGTGGTGTTTGCTCTGTTTTACTTCTATTCGCAAGTGCAGACTAAAAAAACGCGTGAGGAA GGCCCGCTTTGGGTGATGTATTTAGCCAATGGTTTAGCACTGGCTTACGTCGGGATTTTGATCAGCGAAGCGCCAGCATG GCCCGCATCGCTCACTATCTTTGCGGCGATTTTCCTGCTGGGTGCGATGTTCGGACATTTGCTACTGACACTGGCTCGCT CACGCTTACAAGCCTTTCATCGAATCTTGCCTGTGGTAGGGATTGTATCTGCCATGCTCACTGCGTTATGCCTCTTGCCT TATGTTTCTGGTTTGAATGACGAGCAACTGCAAACACTATTGATGCCGATTCTGATGAGCTTTGGTTTGCTGATTGCAGG TGTCGTAGCGTGGTGCTGGCATTTGATCTCTGGCAAAACCGTCAATAAATGGCAGTTATTGCTCGCAGGGCTTTTGGTAC TGGCATCCGCAACCGGATTCCACGGTTTGTACCAAATGCCGTTGTAG
Upstream 100 bases:
>100_bases GGAGTTTCATCCACAGAGGAAATTCGCGGCCGCTGCTTGGGGTTCTCGAAGGAGGTTTGCTATTATCTGCCACCTCGACA GCTCTCTGATTTGGCAAACT
Downstream 100 bases:
>100_bases CGCAGTGGAGTGAAGTGCGTCGCACAGATCACTTTTCGTTACCCAAATAGCGACTATGCTTGATGAAGTTGGGGAGCGGA AACGCTGAGTGAAAACATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MLYSLISVFAPMLLGAQIILTLVLVKGEICPGQRGRIHKVLPALAVLWLAVASIKIEAFLVVFALFYFYSQVQTKKTREE GPLWVMYLANGLALAYVGILISEAPAWPASLTIFAAIFLLGAMFGHLLLTLARSRLQAFHRILPVVGIVSAMLTALCLLP YVSGLNDEQLQTLLMPILMSFGLLIAGVVAWCWHLISGKTVNKWQLLLAGLLVLASATGFHGLYQMPL
Sequences:
>Translated_228_residues MLYSLISVFAPMLLGAQIILTLVLVKGEICPGQRGRIHKVLPALAVLWLAVASIKIEAFLVVFALFYFYSQVQTKKTREE GPLWVMYLANGLALAYVGILISEAPAWPASLTIFAAIFLLGAMFGHLLLTLARSRLQAFHRILPVVGIVSAMLTALCLLP YVSGLNDEQLQTLLMPILMSFGLLIAGVVAWCWHLISGKTVNKWQLLLAGLLVLASATGFHGLYQMPL >Mature_228_residues MLYSLISVFAPMLLGAQIILTLVLVKGEICPGQRGRIHKVLPALAVLWLAVASIKIEAFLVVFALFYFYSQVQTKKTREE GPLWVMYLANGLALAYVGILISEAPAWPASLTIFAAIFLLGAMFGHLLLTLARSRLQAFHRILPVVGIVSAMLTALCLLP YVSGLNDEQLQTLLMPILMSFGLLIAGVVAWCWHLISGKTVNKWQLLLAGLLVLASATGFHGLYQMPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24918; Mature: 24918
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYSLISVFAPMLLGAQIILTLVLVKGEICPGQRGRIHKVLPALAVLWLAVASIKIEAFL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVFALFYFYSQVQTKKTREEGPLWVMYLANGLALAYVGILISEAPAWPASLTIFAAIFLL HHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GAMFGHLLLTLARSRLQAFHRILPVVGIVSAMLTALCLLPYVSGLNDEQLQTLLMPILMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FGLLIAGVVAWCWHLISGKTVNKWQLLLAGLLVLASATGFHGLYQMPL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCC >Mature Secondary Structure MLYSLISVFAPMLLGAQIILTLVLVKGEICPGQRGRIHKVLPALAVLWLAVASIKIEAFL CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VVFALFYFYSQVQTKKTREEGPLWVMYLANGLALAYVGILISEAPAWPASLTIFAAIFLL HHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GAMFGHLLLTLARSRLQAFHRILPVVGIVSAMLTALCLLPYVSGLNDEQLQTLLMPILMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FGLLIAGVVAWCWHLISGKTVNKWQLLLAGLLVLASATGFHGLYQMPL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA