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The map label for this gene is ycfF [C]

Identifier: 147674459

GI number: 147674459

Start: 1597013

End: 1597363

Strand: Reverse

Name: ycfF [C]

Synonym: VC0395_A1487

Alternate gene names: 147674459

Gene position: 1597363-1597013 (Counterclockwise)

Preceding gene: 147675341

Following gene: 147674989

Centisome position: 52.82

GC content: 47.86

Gene sequence:

>351_bases
ATGGCGGAAGAAACCATTTTCAGCAAAATCGTTCGTAGAGAGATTCCCGCTGATATTCTTTATCAAGATGAGTTGGTCAC
TGCATTTCGAGACATTCATCCGCGCGCGCCAAGCCATATTTTGATCATCCCCAATAAGCTCATCCCAACGGTCAATGATG
TTGAAGTTGAAGATGAATTAGCACTCGGTCGGCTGTTTACTGTCGCCAAAAAAATCGCTGAGCAAGAAGGGATCGCCGAA
AACGGCTACCGCTTGATCATGAACTGCAACTCACACGGGGGTCAGGAGGTCTATCACATCCATATGCATTTGGTGGGTGG
TCGTCCGCTTGGGCCGCTTTTGATGGGTTAA

Upstream 100 bases:

>100_bases
TTCTTTTAACTGTACGGTGTTTTTTATTGAGCTTTACTATGCCTTGACGCATACTCAAGCCAGAAAAATTCTTAATCAAA
ACCTTTGTATGGAGTACGTC

Downstream 100 bases:

>100_bases
CTTCATTCTCCGATGTTGATGGTGACGAATCACGTGGTTCAATACATTAAACGACCTATACGTAGCCTCACTCTTACTTC
ACTACTGCTCGCGGGGTGTG

Product: histidine triad family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MAEETIFSKIVRREIPADILYQDELVTAFRDIHPRAPSHILIIPNKLIPTVNDVEVEDELALGRLFTVAKKIAEQEGIAE
NGYRLIMNCNSHGGQEVYHIHMHLVGGRPLGPLLMG

Sequences:

>Translated_116_residues
MAEETIFSKIVRREIPADILYQDELVTAFRDIHPRAPSHILIIPNKLIPTVNDVEVEDELALGRLFTVAKKIAEQEGIAE
NGYRLIMNCNSHGGQEVYHIHMHLVGGRPLGPLLMG
>Mature_115_residues
AEETIFSKIVRREIPADILYQDELVTAFRDIHPRAPSHILIIPNKLIPTVNDVEVEDELALGRLFTVAKKIAEQEGIAEN
GYRLIMNCNSHGGQEVYHIHMHLVGGRPLGPLLMG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI14211923, Length=109, Percent_Identity=49.5412844036697, Blast_Score=116, Evalue=4e-27,
Organism=Homo sapiens, GI4885413, Length=107, Percent_Identity=48.5981308411215, Blast_Score=112, Evalue=8e-26,
Organism=Escherichia coli, GI1787346, Length=114, Percent_Identity=82.4561403508772, Blast_Score=178, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17506713, Length=109, Percent_Identity=43.1192660550459, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI28574010, Length=109, Percent_Identity=44.0366972477064, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24581222, Length=109, Percent_Identity=44.0366972477064, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 13006; Mature: 12875

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEETIFSKIVRREIPADILYQDELVTAFRDIHPRAPSHILIIPNKLIPTVNDVEVEDEL
CCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHH
ALGRLFTVAKKIAEQEGIAENGYRLIMNCNSHGGQEVYHIHMHLVGGRPLGPLLMG
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
AEETIFSKIVRREIPADILYQDELVTAFRDIHPRAPSHILIIPNKLIPTVNDVEVEDEL
CHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHH
ALGRLFTVAKKIAEQEGIAENGYRLIMNCNSHGGQEVYHIHMHLVGGRPLGPLLMG
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]