| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is surE
Identifier: 147674427
GI number: 147674427
Start: 53098
End: 53889
Strand: Direct
Name: surE
Synonym: VC0395_A0059
Alternate gene names: 147674427
Gene position: 53098-53889 (Clockwise)
Preceding gene: 147673999
Following gene: 147675360
Centisome position: 1.76
GC content: 49.87
Gene sequence:
>792_bases ATGAACAAGAGAGCCGCGATTCAGAGAGCGAAGATTAAGATGAAGATTCTACTCAGTAACGATGATGGCGTTTACGCACA AGGCATTCATGCTTTGGCGGATGCATTGCGTGATTTAGCGGAGATTGTGATTGTCGCGCCGGATCGTAACCGCAGTGGTG CCTCGAATTCACTGACCTTAGAGCATCCATTACGAGTGTCGCAAATTGCCGAGAATACCTATTCCGTGCAAGGTACCCCG ACTGATTGCGTGCACTTTGCGCTTAATGAACTGATGAAAGACGCGCTACCGGATCTGGTACTGAGCGGAATCAATCACGG AGCTAACTTGGGTGATGATGTGCTCTATTCCGGTACGGTGGCGGCGGCAATGGAAGGGCATTTTCTTGGCGTGCAGTCGA TCGCCTTTTCTCTGGCGGGAACTACTCATTTTGCTAGTGCTGCTCACTTTGTGCGTCAATTGGTCGAGCAACATCTGGCT AACCCGATTCCGACCAATCGCTTACTTAACGTGAATATTCCGGATCGACCTTTAGAACTCATTCAAGGTATTGAAGTCAC ACGCTTAGGTGCGCGGCATCACGCCGAAAGCATGATAAAGCAGAAAGATCCGCGTGGGCATGATATTTATTGGCTTGGTC CTCCGGGTAAAGAGCAAGATGCCGGTCCGGGAACGGATTTTCATGCGATTGAACGTGGCTGGGTGTCACTCACGCCGCTA CAAGTTGACCTAACGGCACATGAGTCACTGCGTAGCATGGATCATTGGTTAAAGGAAAAGGTGAATGGCTAA
Upstream 100 bases:
>100_bases ATCACTCTGCGTTTCTCATTGGATGCGGGTAGCTTTGCCACTTCCTTAGTGCGTGAATTGATCGAAGAGATCCCAGTGGT GCGTCATTACGATCAAGGCC
Downstream 100 bases:
>100_bases CCCAAAAGCCGACAGACTGATTCAATTTTTAACTGAGCAGGGGATTACCTCACCACAAGTGTTGGCGGCAATCCATGCAC TGCCACGCGAGTTTTTCGTC
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MNKRAAIQRAKIKMKILLSNDDGVYAQGIHALADALRDLAEIVIVAPDRNRSGASNSLTLEHPLRVSQIAENTYSVQGTP TDCVHFALNELMKDALPDLVLSGINHGANLGDDVLYSGTVAAAMEGHFLGVQSIAFSLAGTTHFASAAHFVRQLVEQHLA NPIPTNRLLNVNIPDRPLELIQGIEVTRLGARHHAESMIKQKDPRGHDIYWLGPPGKEQDAGPGTDFHAIERGWVSLTPL QVDLTAHESLRSMDHWLKEKVNG
Sequences:
>Translated_263_residues MNKRAAIQRAKIKMKILLSNDDGVYAQGIHALADALRDLAEIVIVAPDRNRSGASNSLTLEHPLRVSQIAENTYSVQGTP TDCVHFALNELMKDALPDLVLSGINHGANLGDDVLYSGTVAAAMEGHFLGVQSIAFSLAGTTHFASAAHFVRQLVEQHLA NPIPTNRLLNVNIPDRPLELIQGIEVTRLGARHHAESMIKQKDPRGHDIYWLGPPGKEQDAGPGTDFHAIERGWVSLTPL QVDLTAHESLRSMDHWLKEKVNG >Mature_263_residues MNKRAAIQRAKIKMKILLSNDDGVYAQGIHALADALRDLAEIVIVAPDRNRSGASNSLTLEHPLRVSQIAENTYSVQGTP TDCVHFALNELMKDALPDLVLSGINHGANLGDDVLYSGTVAAAMEGHFLGVQSIAFSLAGTTHFASAAHFVRQLVEQHLA NPIPTNRLLNVNIPDRPLELIQGIEVTRLGARHHAESMIKQKDPRGHDIYWLGPPGKEQDAGPGTDFHAIERGWVSLTPL QVDLTAHESLRSMDHWLKEKVNG
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=247, Percent_Identity=56.2753036437247, Blast_Score=283, Evalue=9e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_VIBC3 (A5F9D9)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F9D9 - SMR: A5F9D9 - STRING: A5F9D9 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0059 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: NGFYYVN - ProtClustDB: PRK00346 - BioCyc: VCHO345073:VC0395_A0059-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 28723; Mature: 28723
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRAAIQRAKIKMKILLSNDDGVYAQGIHALADALRDLAEIVIVAPDRNRSGASNSLTL CCCHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE EHPLRVSQIAENTYSVQGTPTDCVHFALNELMKDALPDLVLSGINHGANLGDDVLYSGTV CCCCHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHH AAAMEGHFLGVQSIAFSLAGTTHFASAAHFVRQLVEQHLANPIPTNRLLNVNIPDRPLEL HHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHH IQGIEVTRLGARHHAESMIKQKDPRGHDIYWLGPPGKEQDAGPGTDFHAIERGWVSLTPL HCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEECEE QVDLTAHESLRSMDHWLKEKVNG EEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKRAAIQRAKIKMKILLSNDDGVYAQGIHALADALRDLAEIVIVAPDRNRSGASNSLTL CCCHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE EHPLRVSQIAENTYSVQGTPTDCVHFALNELMKDALPDLVLSGINHGANLGDDVLYSGTV CCCCHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHH AAAMEGHFLGVQSIAFSLAGTTHFASAAHFVRQLVEQHLANPIPTNRLLNVNIPDRPLEL HHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHHHHH IQGIEVTRLGARHHAESMIKQKDPRGHDIYWLGPPGKEQDAGPGTDFHAIERGWVSLTPL HCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCEEECEE QVDLTAHESLRSMDHWLKEKVNG EEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA