Click here to switch to the map view.

The map label for this gene is asmA [H]

Identifier: 147674400

GI number: 147674400

Start: 597287

End: 599398

Strand: Direct

Name: asmA [H]

Synonym: VC0395_A0557

Alternate gene names: 147674400

Gene position: 597287-599398 (Clockwise)

Preceding gene: 147674003

Following gene: 147674630

Centisome position: 19.75

GC content: 48.2

Gene sequence:

>2112_bases
ATGAAAAAACTGTTTATTTCTCTTCTCGGTTTAGTTGTGCTGATTGTTGGCGCACTGCTGGCCTTAGTGTTGTTGGTTAA
CCCCAACCAATTTAAACCTTTAATCGTAGAGCAAGCCAAAAAACAAACTGGCTTAGATTTGGTGATTGAAGGCGATATTG
GCTGGCAATTTTTCCCATCTATCGGTTTTGAGTTAGGCAAAACCGAGCTGAAAAACCCGCAAGGTTTTGCTAGCCCAAAC
CTGTTTAAAGTTGAGAGTGTGGGTATTGATGTCTCAGTGATGCCACTGCTCGATAAACAGCTCAAAATCGGCAACATCCG
TTTGGATGGCGCAGAGTTCCATCTGGAAACGCTTAAAGATGGTCGCTCCAATTTGGATGCCTTGACGCAAGCGCAATCTA
AACCCGCGTCCGCGCCAGCGACAACCGACTCTGCACCCGCTTCTCAGCCAAGCTCAAGCGAGCCAGCCGCGGCGTGGAGT
ATTGAATTAGGGGGCGTGTCTGTCTCCAATGCGGTGTTGGAAATAACGGATAAAAAAGCGGGTTCGCATACCAAGCTGTA
TGACGTTCAACTGAGCGTTGCTGAGTTTGTGCCAGACAGCTGGACGAAAGCGACCTTTGCCGCGAAAGGCGATAAAGATC
AGCAAAAGTTTGCCGCGCAAGGTGAAGCGGAAGTGCGCCTATCGGCGGATTTCAAGCAGTATGCGCTGCGTGACATTAAG
CTTGATGCGAGCTTTAGTGATCCGAGTAACCAAATCGATTCAGTCAAACTGAAACTCGACACCTTTGAGTTTGATAAAGC
CAATGCGCTGACCTTCTCTGTGGCGGGTAAAGCGGCAGACATGAAGCTTAATGCGCAAGGTTCTGCCTCATTGATGGTCA
ATCAAGCGATGAGCAAAGTGGGTTTGGATGCGCTGAAACTGCAAGCCGAACTGGAAGGGGCTGCGTTACCGCAATCACCG
ATGAAGTTAAGTTTAGACTCTCAAATTGCTTTCGATTTGACACAAAACCATCTCAGTGTGCTGCTCAACAAACTAACGGC
TAATGCGCTAAGTTTCGATGGCAAAGCGGATGTCACTCTCGCAGATATTCCGAAAGTGCGTTTCAACTTGCACAGCCCTG
AGATTGACTTGGATGCCTTCTTAGGCACGAAAGCTCAAGAGTCGCAACCTGCGCCAGCCAAGGAAGCAGCGGCATCCTCA
GCGTCAGCACCCGTGACAAATGCCCCAGCAGAAGTGGAACCGGACTTGTCGGCACTCAACGCCTTGGATGTGGCCGGTGA
GATCAGCATTGATAAATTCAAAGCCAGCAACGCCCATCTGCAAAATGTAAAAGCGAATTTTGCGGTCAATCGTGGCGTGG
TGGATTTGAAATCCTTCACCGCGAATCTGTATCAAGGATCCGTGCAAGCTAGCGCGCAAGTGGATGCGCGTAAAACGCCC
GCGACTTACAGTGTGAAGAAGCAGATCAAAGGGGTACAGGTTAAGCCTTTACTAAAAGATGTGCTGAACAACGAAATGCT
AGAAGGGACAGGCAATATTGATATGAATGTGCAAGGCCAGAGCCTAACACCAAGCGGCATCCAGAAAAATCTGGTTGGTA
CTGTGGCGATTAACTTTGCCGATGGTGCGGTGAAGGGCATTAACGTGGCGCACTTGATTCGTACCCACTACGCCAAGATC
AAAGGCCAAAATGTTGAAGAAGCGGATGCGGTAAAGAAAACCGACTTTAGTGCGATGACGACGACGCTGAAACTCAATAA
AGGTGAAGTAACGACCAACGATCTTAATATGCAATCGCCATTGCTGCGCATTCATGGTGAAGGTAAAGCCAATTACCTAC
AGCAGAATGTCGATTTTCTGGTGCGTACTTCGATTGTTGGAACCTTGGAAGGTCAGGGCGGTAAGAGTTTAGATGAGCTG
CGCGATGTGACTATCCCGATCAATATTTCAGGTGCGTGGAGCGATCCGAAGTTCCGTTTGGTGTTTGATGATGTACTCAA
ACAAAAAGCCAAGAAAGAAGTGGATCGCGGCGTGGAAAAACTGACCGATAAAATCAAAGATGAAGACACCAAAAAAGCGG
TGGATGGGTTGCTAAAAGGTCTATTTAACTGA

Upstream 100 bases:

>100_bases
TAATTTTGACCAGAGCTTTGCATCGCTTAGCTTTATTTTTCAAAGTAGAAGTGGCACTTTAAGTGCCACTTTCTTTTTCT
CGTCAAGCAAGGAAAAGCAG

Downstream 100 bases:

>100_bases
TGGTTATGCATCGCTAATGAAACTAAAAAGGGCTGAATATCAGCCCTTTCTTATTGATTTTTTTAAGTGTTTTACCAATC
GACCCCTTTAAGGGCTTTCA

Product: asmA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:

>703_residues
MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPSIGFELGKTELKNPQGFASPN
LFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKDGRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWS
IELGGVSVSNAVLEITDKKAGSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRDIK
LDASFSDPSNQIDSVKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAMSKVGLDALKLQAELEGAALPQSP
MKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASS
ASAPVTNAPAEVEPDLSALNALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTP
ATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDMNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKI
KGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDEL
RDVTIPINISGAWSDPKFRLVFDDVLKQKAKKEVDRGVEKLTDKIKDEDTKKAVDGLLKGLFN

Sequences:

>Translated_703_residues
MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPSIGFELGKTELKNPQGFASPN
LFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKDGRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWS
IELGGVSVSNAVLEITDKKAGSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRDIK
LDASFSDPSNQIDSVKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAMSKVGLDALKLQAELEGAALPQSP
MKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASS
ASAPVTNAPAEVEPDLSALNALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTP
ATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDMNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKI
KGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDEL
RDVTIPINISGAWSDPKFRLVFDDVLKQKAKKEVDRGVEKLTDKIKDEDTKKAVDGLLKGLFN
>Mature_703_residues
MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPSIGFELGKTELKNPQGFASPN
LFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKDGRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWS
IELGGVSVSNAVLEITDKKAGSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRDIK
LDASFSDPSNQIDSVKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAMSKVGLDALKLQAELEGAALPQSP
MKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTLADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASS
ASAPVTNAPAEVEPDLSALNALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTP
ATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDMNVQGQSLTPSGIQKNLVGTVAINFADGAVKGINVAHLIRTHYAKI
KGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSPLLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDEL
RDVTIPINISGAWSDPKFRLVFDDVLKQKAKKEVDRGVEKLTDKIKDEDTKKAVDGLLKGLFN

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=402, Percent_Identity=24.1293532338308, Blast_Score=111, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 75355; Mature: 75355

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEECCC
IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD
CCCCCCCHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEECEEEECCHHHHHHHHHC
GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCEEEEEECCCC
GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRDIK
CCCCEEEEEEEEHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHEEE
LDASFSDPSNQIDSVKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAMSKV
EECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHH
GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTL
CCHHEEEHHHCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSASAPVTNAPAEVEPDLSALN
ECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHH
ALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTP
HHCCCCCCEEEEEECCCCHHHHCEECEEECCCEEEHHHHHHHHHCCCCCCCEECCCCCCC
ATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDMNVQGQSLTPSGIQKNLVGTVAINFA
CCHHHHHHHCCCEECHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEEEEEEC
DGAVKGINVAHLIRTHYAKIKGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSP
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECCCCEEECCCCCCCC
LLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDELRDVTIPINISGAWSDPKFRL
EEEEECCCCHHHHHHHHHHEEEEHEEEEECCCCCCCHHHHCCEEEEEEECCCCCCCCEEE
VFDDVLKQKAKKEVDRGVEKLTDKIKDEDTKKAVDGLLKGLFN
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKLFISLLGLVVLIVGALLALVLLVNPNQFKPLIVEQAKKQTGLDLVIEGDIGWQFFPS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCCEECCC
IGFELGKTELKNPQGFASPNLFKVESVGIDVSVMPLLDKQLKIGNIRLDGAEFHLETLKD
CCCCCCCHHCCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEECEEEECCHHHHHHHHHC
GRSNLDALTQAQSKPASAPATTDSAPASQPSSSEPAAAWSIELGGVSVSNAVLEITDKKA
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCEEEEEECCCC
GSHTKLYDVQLSVAEFVPDSWTKATFAAKGDKDQQKFAAQGEAEVRLSADFKQYALRDIK
CCCCEEEEEEEEHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEECCHHHHHHHEEE
LDASFSDPSNQIDSVKLKLDTFEFDKANALTFSVAGKAADMKLNAQGSASLMVNQAMSKV
EECCCCCCCCCCCEEEEEEEEEECCCCCEEEEEECCCCCCEEECCCCCHHHHHHHHHHHH
GLDALKLQAELEGAALPQSPMKLSLDSQIAFDLTQNHLSVLLNKLTANALSFDGKADVTL
CCHHEEEHHHCCCCCCCCCCCEEECCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
ADIPKVRFNLHSPEIDLDAFLGTKAQESQPAPAKEAAASSASAPVTNAPAEVEPDLSALN
ECCCCEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHH
ALDVAGEISIDKFKASNAHLQNVKANFAVNRGVVDLKSFTANLYQGSVQASAQVDARKTP
HHCCCCCCEEEEEECCCCHHHHCEECEEECCCEEEHHHHHHHHHCCCCCCCEECCCCCCC
ATYSVKKQIKGVQVKPLLKDVLNNEMLEGTGNIDMNVQGQSLTPSGIQKNLVGTVAINFA
CCHHHHHHHCCCEECHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEEEEEEC
DGAVKGINVAHLIRTHYAKIKGQNVEEADAVKKTDFSAMTTTLKLNKGEVTTNDLNMQSP
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEEECCCCEEECCCCCCCC
LLRIHGEGKANYLQQNVDFLVRTSIVGTLEGQGGKSLDELRDVTIPINISGAWSDPKFRL
EEEEECCCCHHHHHHHHHHEEEEHEEEEECCCCCCCHHHHCCEEEEEEECCCCCCCCEEE
VFDDVLKQKAKKEVDRGVEKLTDKIKDEDTKKAVDGLLKGLFN
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]