Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147674376

Identifier: 147674376

GI number: 147674376

Start: 2517893

End: 2520082

Strand: Reverse

Name: 147674376

Synonym: VC0395_A2364

Alternate gene names: NA

Gene position: 2520082-2517893 (Counterclockwise)

Preceding gene: 147675616

Following gene: 147674449

Centisome position: 83.33

GC content: 39.27

Gene sequence:

>2190_bases
ATGTTGACTTTTGAAAACCCACAAAATCTAGACTTAACATTAGGTGCTATGCGCTCCATTGGCGATCAAGAAGATTATTT
GCAGCAGGTACTTCTCCCTGCACTACTGCGAGGTAACTGGGAAGAATTAGACAAGATGGTTGTCTATCAAGATGAGAAAA
AGACTATCTTGTTTGAGGAAGATCTATGGGCGTTTAGAGAGTCTGCTTGTAAAGCAAAAGGCATAGCGAACCTGTATTTT
AATATTGAGCTAGAACAAGGTGAGAATGTCATTGCTCTTCGTCAAAATGAGCGTCACTTGGTTAATCAAATGAAATGCGC
GGCATTAGCTTATATGTGGTTTTCAGCTAAGCACATAGAGCTGGGTTCCATCAAAACTAAAGTAAACGTTCTTCGGAATG
ATATTGCTCAACTTATTAAGCGTGGCATCACTTCATTTGAAGAGTTAAATCTAGAGCACCTTGAAATTTTGGTTGATGAA
GGATGTTTTGAAATATCTAAAAGCCACCCATTTAGAGGGTTAAACTCTTTTCCCGCTTTAAAAGGCTTACTGCCCTTCAA
GGTTAACTTTTCGCATCTGACTCATAAGATGTTTAACACAAGACCTGAGGTGTCGGAAGGTAAATTAGTGATCCCTCCTA
GGATCTATTTTTCGGCATTGACAGAGTACAGCAAAGATGTCGTAAACGCCTATGGATTGAGAGATGAAATCGAACAAGCG
GTTGAGAAGATGATTTCCTATTATGATAATGAAGTAATAAATAGAACTTTGAAAATAAGAAATGGATATAGTTATTCACC
TATTAAAGGGTATCGAAAAACATGGGAACGATTTACCCAAGCGCTAGACAATGAAGGGGTTGCCTTGGCTGATAAAGGTG
AAGATCCACGATGGATGAAAATATTCATCTCGCTTGAAACCTTTATTGAGCCACGTCAAAGTGTAATTAAGAACTTCAAA
GTATGGATTGGTGACACTTGTTATGGGTGGAGTGATTTTAAAAGGTATTTGGTCGGTTTGAGCGCAAAAGCCTCGTGGTT
ATGTTTAGCGCTATCAGGGATGCGTGTAGACGAGTTGTACAAAATTAGCCCTGTCTACGGGACGCAAAAAATGATGTTCG
ATAAAAATGGCTGTGAGTCCGATACTGGTAATGAAACTATTTACTTTTTAAGTACACGCCAATCAAAAATTACACTAAAC
AGCCAAACCAAAAACGACACCTTTGTTACCACCGAAATGGGTTGGAAAGCATTTCATGTGTTAAATTCCATTCATACGCC
TTATCGAAACAGGTTTCCAGAAAAGGACAGACATCGAATGTTCGCAAATTTGGCTAACAATCAATATTTCAAGCCTGTAA
AAAAGGCGGCGCTAGGTAAATCAATCAAAAATAATTTTAATAAAGACAAATTTGATTTTATTCTGACGGTTGAAGATATG
GGCTATTTACAAGCCTCAGACCCAGCCCAGAAGTCCTTTAAACTGGGAGATAAGTTTCACTTTACGACACATCAGACAAG
ACGCTCACTTGCTTATTACCTAATTGGTTATGAGCTATGTTCTTTCCCTGCTTTGAAGCAACAGTTGTCACATTTGTCGA
TGGCGATGACGAGATGGTATGCCCGTAATGCCCATTCATTTGAACAGCTTTACAGTGAAATTAGCAAAGAGCGGATCACT
CAAAAGGCTGAAATTTTTGCTCGCATATATCAAAAAATGGCGAACGGTGAACGGATTGCAGGTGGCAAAGGTCAAGCAAT
GGTTGCTGAAATCAGTCGTGAAGGTGAAAGCTATTTTGAAAATGGGGTAAACAAACGCAAGTTATCAATTGATTATTGGA
TTGATCAGTTAACTAACGGTAAGGCGCACTTACATGCCGTTGCTCCTAGTATGTATTGCACCAACACTCAATGTTCAATG
CGCATCAATATTGATTTAAGTGAGTGTGTGGACTGCGAATACGATTTTATTGAAAACGCTGTTTATGCCGAATCTTCTCG
CATGGATGCGATGAGAAATATTGAGTTTCTAAAAGAATGCGGTGACTTGAACTCCAGTGCCGCAACTAAATACTTTATGC
AGGTAAAAGCGGCAGAGGCGATCATGGATGATTTGGGATTCGACCATGATAAGTATGAGTTTGCAGAAGATGTGCGGAGT
TTAGTTATAAACACGATAATGGTGGCGTAA

Upstream 100 bases:

>100_bases
AAACTATCGAGAAAGCTGAAGATTTACTTGAAGAAAAAGGACGTTATCCGCTTTTTCACTCGTTATCTTCCGTTACTCAG
TTTCTATAAGGAGCATACCT

Downstream 100 bases:

>100_bases
GACATGACAGATAGAACGGAATTAAGCTCAACAGAAAAGCAGTTGAGAGAAGCTCTGAAGCGTCTTATTGACAAACAGCC
GACCCACAGGGAGTTGAAGC

Product: site-specific recombinase, phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein

Number of amino acids: Translated: 729; Mature: 729

Protein sequence:

>729_residues
MLTFENPQNLDLTLGAMRSIGDQEDYLQQVLLPALLRGNWEELDKMVVYQDEKKTILFEEDLWAFRESACKAKGIANLYF
NIELEQGENVIALRQNERHLVNQMKCAALAYMWFSAKHIELGSIKTKVNVLRNDIAQLIKRGITSFEELNLEHLEILVDE
GCFEISKSHPFRGLNSFPALKGLLPFKVNFSHLTHKMFNTRPEVSEGKLVIPPRIYFSALTEYSKDVVNAYGLRDEIEQA
VEKMISYYDNEVINRTLKIRNGYSYSPIKGYRKTWERFTQALDNEGVALADKGEDPRWMKIFISLETFIEPRQSVIKNFK
VWIGDTCYGWSDFKRYLVGLSAKASWLCLALSGMRVDELYKISPVYGTQKMMFDKNGCESDTGNETIYFLSTRQSKITLN
SQTKNDTFVTTEMGWKAFHVLNSIHTPYRNRFPEKDRHRMFANLANNQYFKPVKKAALGKSIKNNFNKDKFDFILTVEDM
GYLQASDPAQKSFKLGDKFHFTTHQTRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWYARNAHSFEQLYSEISKERIT
QKAEIFARIYQKMANGERIAGGKGQAMVAEISREGESYFENGVNKRKLSIDYWIDQLTNGKAHLHAVAPSMYCTNTQCSM
RINIDLSECVDCEYDFIENAVYAESSRMDAMRNIEFLKECGDLNSSAATKYFMQVKAAEAIMDDLGFDHDKYEFAEDVRS
LVINTIMVA

Sequences:

>Translated_729_residues
MLTFENPQNLDLTLGAMRSIGDQEDYLQQVLLPALLRGNWEELDKMVVYQDEKKTILFEEDLWAFRESACKAKGIANLYF
NIELEQGENVIALRQNERHLVNQMKCAALAYMWFSAKHIELGSIKTKVNVLRNDIAQLIKRGITSFEELNLEHLEILVDE
GCFEISKSHPFRGLNSFPALKGLLPFKVNFSHLTHKMFNTRPEVSEGKLVIPPRIYFSALTEYSKDVVNAYGLRDEIEQA
VEKMISYYDNEVINRTLKIRNGYSYSPIKGYRKTWERFTQALDNEGVALADKGEDPRWMKIFISLETFIEPRQSVIKNFK
VWIGDTCYGWSDFKRYLVGLSAKASWLCLALSGMRVDELYKISPVYGTQKMMFDKNGCESDTGNETIYFLSTRQSKITLN
SQTKNDTFVTTEMGWKAFHVLNSIHTPYRNRFPEKDRHRMFANLANNQYFKPVKKAALGKSIKNNFNKDKFDFILTVEDM
GYLQASDPAQKSFKLGDKFHFTTHQTRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWYARNAHSFEQLYSEISKERIT
QKAEIFARIYQKMANGERIAGGKGQAMVAEISREGESYFENGVNKRKLSIDYWIDQLTNGKAHLHAVAPSMYCTNTQCSM
RINIDLSECVDCEYDFIENAVYAESSRMDAMRNIEFLKECGDLNSSAATKYFMQVKAAEAIMDDLGFDHDKYEFAEDVRS
LVINTIMVA
>Mature_729_residues
MLTFENPQNLDLTLGAMRSIGDQEDYLQQVLLPALLRGNWEELDKMVVYQDEKKTILFEEDLWAFRESACKAKGIANLYF
NIELEQGENVIALRQNERHLVNQMKCAALAYMWFSAKHIELGSIKTKVNVLRNDIAQLIKRGITSFEELNLEHLEILVDE
GCFEISKSHPFRGLNSFPALKGLLPFKVNFSHLTHKMFNTRPEVSEGKLVIPPRIYFSALTEYSKDVVNAYGLRDEIEQA
VEKMISYYDNEVINRTLKIRNGYSYSPIKGYRKTWERFTQALDNEGVALADKGEDPRWMKIFISLETFIEPRQSVIKNFK
VWIGDTCYGWSDFKRYLVGLSAKASWLCLALSGMRVDELYKISPVYGTQKMMFDKNGCESDTGNETIYFLSTRQSKITLN
SQTKNDTFVTTEMGWKAFHVLNSIHTPYRNRFPEKDRHRMFANLANNQYFKPVKKAALGKSIKNNFNKDKFDFILTVEDM
GYLQASDPAQKSFKLGDKFHFTTHQTRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWYARNAHSFEQLYSEISKERIT
QKAEIFARIYQKMANGERIAGGKGQAMVAEISREGESYFENGVNKRKLSIDYWIDQLTNGKAHLHAVAPSMYCTNTQCSM
RINIDLSECVDCEYDFIENAVYAESSRMDAMRNIEFLKECGDLNSSAATKYFMQVKAAEAIMDDLGFDHDKYEFAEDVRS
LVINTIMVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84152; Mature: 84152

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFENPQNLDLTLGAMRSIGDQEDYLQQVLLPALLRGNWEELDKMVVYQDEKKTILFEE
CCCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCEEEEHH
DLWAFRESACKAKGIANLYFNIELEQGENVIALRQNERHLVNQMKCAALAYMWFSAKHIE
HHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEE
LGSIKTKVNVLRNDIAQLIKRGITSFEELNLEHLEILVDEGCFEISKSHPFRGLNSFPAL
ECCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCHH
KGLLPFKVNFSHLTHKMFNTRPEVSEGKLVIPPRIYFSALTEYSKDVVNAYGLRDEIEQA
HCCCCEEECHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHH
VEKMISYYDNEVINRTLKIRNGYSYSPIKGYRKTWERFTQALDNEGVALADKGEDPRWMK
HHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE
IFISLETFIEPRQSVIKNFKVWIGDTCYGWSDFKRYLVGLSAKASWLCLALSGMRVDELY
EEEEHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHE
KISPVYGTQKMMFDKNGCESDTGNETIYFLSTRQSKITLNSQTKNDTFVTTEMGWKAFHV
EECCCCCCHHHEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCCHHHHHH
LNSIHTPYRNRFPEKDRHRMFANLANNQYFKPVKKAALGKSIKNNFNKDKFDFILTVEDM
HHHHCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
GYLQASDPAQKSFKLGDKFHFTTHQTRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWY
CCEECCCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARNAHSFEQLYSEISKERITQKAEIFARIYQKMANGERIAGGKGQAMVAEISREGESYFE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCHHHHH
NGVNKRKLSIDYWIDQLTNGKAHLHAVAPSMYCTNTQCSMRINIDLSECVDCEYDFIENA
CCCCCEEEEHHHHHHHHCCCCEEEEEECCCEEECCCCEEEEEECCHHHHCCCCHHHHHHH
VYAESSRMDAMRNIEFLKECGDLNSSAATKYFMQVKAAEAIMDDLGFDHDKYEFAEDVRS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LVINTIMVA
HHHHHHHCC
>Mature Secondary Structure
MLTFENPQNLDLTLGAMRSIGDQEDYLQQVLLPALLRGNWEELDKMVVYQDEKKTILFEE
CCCCCCCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCEEEEHH
DLWAFRESACKAKGIANLYFNIELEQGENVIALRQNERHLVNQMKCAALAYMWFSAKHIE
HHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEE
LGSIKTKVNVLRNDIAQLIKRGITSFEELNLEHLEILVDEGCFEISKSHPFRGLNSFPAL
ECCHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCHH
KGLLPFKVNFSHLTHKMFNTRPEVSEGKLVIPPRIYFSALTEYSKDVVNAYGLRDEIEQA
HCCCCEEECHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHH
VEKMISYYDNEVINRTLKIRNGYSYSPIKGYRKTWERFTQALDNEGVALADKGEDPRWMK
HHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEE
IFISLETFIEPRQSVIKNFKVWIGDTCYGWSDFKRYLVGLSAKASWLCLALSGMRVDELY
EEEEHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCHHHHE
KISPVYGTQKMMFDKNGCESDTGNETIYFLSTRQSKITLNSQTKNDTFVTTEMGWKAFHV
EECCCCCCHHHEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCEEEEECCCHHHHHH
LNSIHTPYRNRFPEKDRHRMFANLANNQYFKPVKKAALGKSIKNNFNKDKFDFILTVEDM
HHHHCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC
GYLQASDPAQKSFKLGDKFHFTTHQTRRSLAYYLIGYELCSFPALKQQLSHLSMAMTRWY
CCEECCCCHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ARNAHSFEQLYSEISKERITQKAEIFARIYQKMANGERIAGGKGQAMVAEISREGESYFE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHCCHHHHH
NGVNKRKLSIDYWIDQLTNGKAHLHAVAPSMYCTNTQCSMRINIDLSECVDCEYDFIENA
CCCCCEEEEHHHHHHHHCCCCEEEEEECCCEEECCCCEEEEEECCHHHHCCCCHHHHHHH
VYAESSRMDAMRNIEFLKECGDLNSSAATKYFMQVKAAEAIMDDLGFDHDKYEFAEDVRS
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LVINTIMVA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA