| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is hemH [H]
Identifier: 147674210
GI number: 147674210
Start: 541978
End: 542952
Strand: Direct
Name: hemH [H]
Synonym: VC0395_A0508
Alternate gene names: 147674210
Gene position: 541978-542952 (Clockwise)
Preceding gene: 147673458
Following gene: 147674992
Centisome position: 17.92
GC content: 47.59
Gene sequence:
>975_bases TTGAAGGAAGCCATGAATAATCATAAAAAACTTGGCATTTTGCTTGCCAACTTAGGTACTCCGCAAGCGCCAACCTCTCA AGCGGTAAAAGCGTTTTTGAGCCAATTTCTGCATGATCAGCGAGTGGTAGACATGAGTCGTTGGTTATGGTGCCCCCTTT TACATGGCATTATCTTGCCAACGCGATCGCCTAAGGTGGCTAAGCTGTATCAATCAATCTGGATGGATGAGGGATCGCCT TTGATGGTCTACTCTCGACGTCAACGCGATAAATTGGCAGAGCTTAGCCAACGGCCTGTTGAGCTAGGGATGACCTACGG AGAGCCGAGTTTATTGGAGGGTGTACGCAAGTTGCAGCAACAAGGTGTTGAACAGATAGTGGTGCTGCCGCTTTATCCGC AATATTCCGCGACGACAACGGCGGCGGTGTTTGATGGTCTCGCCAAAGCGTTGCGTCAGTTACCTGTAGTCCCTGAATTG CACTTTATTCGTGATTATCATGACCATCCACTCTATATCCAAGCCCTCGCGAAAAGCGTTCGTGCTTCATGGCAACAACA TGGACAAGGTGATCTGTTACTCTGCTCTTACCATGGTATTCCCAAACGTTATGCGCAAAATGGCGATATCTACCCAGAGC ATTGCCTAAAAACCACAGAGTTATTGGCTCAAGCATTAGGATTGCCTCAAGATAAAGTCATGATGACTTACCAATCTCAG TTTGGTAAGGAAGAGTGGCTGCAGCCATACACGGACAAGACGATGGAAGCGCTTCCTCGCCAAGGCATTAAAAAGCTTGA TGTTATTTGCCCTGCCTTTTCAGTGGACTGCTTAGAAACGCTGGAAGAAATTGCTGAGCAGAACCAAGAAATCTTTTTGC ACAGTGGTGGCGAAGCGTTCCACTATGTCCCCTGTTTGAATGACAGTCAGAGCCACATTGAGCTGATGGCCGCGCTGGTT AAAGCCCATTGTTAA
Upstream 100 bases:
>100_bases TGCTGATTGCATTGATAGGTGAAATAAAGCGGCAGTAAAGCCGCTTTTTTTATAAACTTTTTACCAGAAAGAGACGTAAT AACGTATTCAACAGTGCATT
Downstream 100 bases:
>100_bases GCTTCAACGTGAGCGAGTCATGCATAAAGCAGCCATACAAAAACAGCGCCTCATTCGGCGCTGTTTTCAGTTCCACGGCG TATTTATGATTCCATCTTTA
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILPTRSPKVAKLYQSIWMDEGSP LMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQQGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPEL HFIRDYHDHPLYIQALAKSVRASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAFHYVPCLNDSQSHIELMAALV KAHC
Sequences:
>Translated_324_residues MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILPTRSPKVAKLYQSIWMDEGSP LMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQQGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPEL HFIRDYHDHPLYIQALAKSVRASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAFHYVPCLNDSQSHIELMAALV KAHC >Mature_324_residues MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILPTRSPKVAKLYQSIWMDEGSP LMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQQGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPEL HFIRDYHDHPLYIQALAKSVRASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAFHYVPCLNDSQSHIELMAALV KAHC
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=329, Percent_Identity=24.0121580547112, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI60499021, Length=329, Percent_Identity=24.0121580547112, Blast_Score=92, Evalue=4e-19, Organism=Escherichia coli, GI1786681, Length=315, Percent_Identity=59.3650793650794, Blast_Score=377, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6324750, Length=342, Percent_Identity=26.6081871345029, Blast_Score=90, Evalue=4e-19, Organism=Drosophila melanogaster, GI17864156, Length=332, Percent_Identity=25.6024096385542, Blast_Score=98, Evalue=6e-21, Organism=Drosophila melanogaster, GI24651774, Length=265, Percent_Identity=25.2830188679245, Blast_Score=79, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 36702; Mature: 36702
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILP CCCHHHCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRSPKVAKLYQSIWMDEGSPLMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQ CCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH QGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPELHFIRDYHDHPLYIQALAKSV CCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHH RASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ HHHHHHCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAF CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEE HYVPCLNDSQSHIELMAALVKAHC EEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKEAMNNHKKLGILLANLGTPQAPTSQAVKAFLSQFLHDQRVVDMSRWLWCPLLHGIILP CCCHHHCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TRSPKVAKLYQSIWMDEGSPLMVYSRRQRDKLAELSQRPVELGMTYGEPSLLEGVRKLQQ CCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHH QGVEQIVVLPLYPQYSATTTAAVFDGLAKALRQLPVVPELHFIRDYHDHPLYIQALAKSV CCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHHHHHH RASWQQHGQGDLLLCSYHGIPKRYAQNGDIYPEHCLKTTELLAQALGLPQDKVMMTYQSQ HHHHHHCCCCCEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH FGKEEWLQPYTDKTMEALPRQGIKKLDVICPAFSVDCLETLEEIAEQNQEIFLHSGGEAF CCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCEE HYVPCLNDSQSHIELMAALVKAHC EEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]