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The map label for this gene is ydhJ [H]

Identifier: 147674168

GI number: 147674168

Start: 157072

End: 158172

Strand: Direct

Name: ydhJ [H]

Synonym: VC0395_A0157

Alternate gene names: 147674168

Gene position: 157072-158172 (Clockwise)

Preceding gene: 147673412

Following gene: 147674212

Centisome position: 5.19

GC content: 49.14

Gene sequence:

>1101_bases
ATGTTTCCGCTCAAAACTTCTTCACGTCAAGCGCGCGACTACTTTCTGCATCAACCTTGGCTGATTTCTTTTTCCTTCAT
TATTCTGTTAGCACTCTGGTTAGGCTTAGGCGATTCCAACGCCGAAGAGCCGCAAACGGCGATGGAAATACAAGTCCCTT
TAGCCAAAGTCGGTTATCAAACGTTTAGCGCAACTCAAACCGATAAAGTTATCGAGCTGTACGGACGCACTGCGCCGGAT
CGGCAGGCTAAAATTGGTGCTGAAATTGCTGGGCGGATCGCCGAGGTGAAGATTGCGAAAGGGCAAATGGTCACCAAAAA
CCAGATAATCGCCTTGATTGATAAAGGCGATCTGGATGCCCAGTTAGAGCGAGCGAAAGCGCAGCTCAAAGTGCGACAAC
AAGAGTTTAATGCGGCTAGTGCACTGAAAAATAAAGGCTTACAAGGCGAAGTTGCTTTTACCAATGCTGCTGCTGCTCTC
ACAGATGCACAATCCTCGCTCAGTACTGTGCAACGTTTACTGGATAATACCCAAGTTCGCGCCCCCTTTGATGGTGTCGT
GGAGACTTTACCTATCGAAAAAGGCGATTTTGTTGGGATTGGCGATCCGGTTGCCTCCATTATCGATCTGCACAAATTGG
TGATAGAGGCTGATGTCAGTGAGCGACACATTCAACATGTACAGCTTGAACAAGCGGCGCGGATCCGCTTTATCGATGGC
ACGCAAACACAAGGTAAAGTCCGCTATATTTCAAGGCTCTCATCGCCTGCAACCAATACCTTTGCCATTGAAGTTGAGGT
CGATAACCCACAACAAGCCATTCCTGCAGGGGTAAGCGCAGAAGTTGAGTTGAGCCTAATGTCTCAAGCCGCGATCAAAA
TCACCCCCGCCATGCTCGCGCTCGATGAAGAGGGCAACCTTGGCGTGAAAACGTTGCAAGGTGAACACGTCAAGTTTGTG
CCAATCCAACTGGTGAAAGCAGAACAAGATGGCGTCTGGTTAACCGGACTTGGCGAGCAAGTGGATATTATTACCCGTGG
ACAAGGATTTGTTCGCGATGGAGATAAGGTTCTCGCCACTCAACTCAGCGCAACCCACTAG

Upstream 100 bases:

>100_bases
TAATCCTGAGATTTTTCAGGAAAATAAGGCCAGTCGATAAACTCGATTGGCCGACGCTGCGTATTAGGATGTCACGCAGC
GATAACAATAAGGAATAGTT

Downstream 100 bases:

>100_bases
GAGCCGCACCATGTTCACTCTGATTGATGCGGCGCTGTCTCGTACGCGCACCATGTTGACCTTACTGGTGTTCATTTTGG
TTGCGGGTGTGGCGACTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MFPLKTSSRQARDYFLHQPWLISFSFIILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPD
RQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAAL
TDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDG
TQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEHVKFV
PIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLATQLSATH

Sequences:

>Translated_366_residues
MFPLKTSSRQARDYFLHQPWLISFSFIILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPD
RQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAAL
TDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDG
TQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEHVKFV
PIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLATQLSATH
>Mature_366_residues
MFPLKTSSRQARDYFLHQPWLISFSFIILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQTFSATQTDKVIELYGRTAPD
RQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDAQLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAAL
TDAQSSLSTVQRLLDNTQVRAPFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDG
TQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLALDEEGNLGVKTLQGEHVKFV
PIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLATQLSATH

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI87081951, Length=185, Percent_Identity=29.7297297297297, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 39797; Mature: 39797

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLKTSSRQARDYFLHQPWLISFSFIILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQ
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCH
TFSATQTDKVIELYGRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDA
HHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCEEECCCEEEEEECCCCHH
QLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEC
APFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDG
CCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECC
TQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLA
CCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHCCCCCCCEEEEEEHHCHHEEEEEEEEE
LDEEGNLGVKTLQGEHVKFVPIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLAT
ECCCCCCCEEEECCCCEEEEEEEEEEECCCCEEEEECCCEEEEEECCCCCEECCCCEEEE
QLSATH
HHCCCC
>Mature Secondary Structure
MFPLKTSSRQARDYFLHQPWLISFSFIILLALWLGLGDSNAEEPQTAMEIQVPLAKVGYQ
CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCHHHHCCH
TFSATQTDKVIELYGRTAPDRQAKIGAEIAGRIAEVKIAKGQMVTKNQIIALIDKGDLDA
HHCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEEEECCCEEECCCEEEEEECCCCHH
QLERAKAQLKVRQQEFNAASALKNKGLQGEVAFTNAAAALTDAQSSLSTVQRLLDNTQVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCEEC
APFDGVVETLPIEKGDFVGIGDPVASIIDLHKLVIEADVSERHIQHVQLEQAARIRFIDG
CCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECC
TQTQGKVRYISRLSSPATNTFAIEVEVDNPQQAIPAGVSAEVELSLMSQAAIKITPAMLA
CCCCCHHHHHHHHCCCCCCEEEEEEEECCCHHHCCCCCCCEEEEEEHHCHHEEEEEEEEE
LDEEGNLGVKTLQGEHVKFVPIQLVKAEQDGVWLTGLGEQVDIITRGQGFVRDGDKVLAT
ECCCCCCCEEEECCCCEEEEEEEEEEECCCCEEEEECCCEEEEEECCCCCEECCCCEEEE
QLSATH
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]