| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is erpA
Identifier: 147673412
GI number: 147673412
Start: 156633
End: 156974
Strand: Direct
Name: erpA
Synonym: VC0395_A0156
Alternate gene names: 147673412
Gene position: 156633-156974 (Clockwise)
Preceding gene: 147675430
Following gene: 147674168
Centisome position: 5.18
GC content: 45.32
Gene sequence:
>342_bases GTGAGCGAAGTTAATGTTCCATTATCCTTTTCTGATGCGGCAGCAAAACGTGTTAAAGCGTTGATCGCAGAAGAAGAAAA TCCATCGTTAATGTTGCGTGTTTACATCACTGGTGGTGGTTGTAGCGGCTTCCAATATGGCTTTACTTTCGATGAAACCG TCAACGAAGGTGACACCAAAATTGAGAATAGCGGCGTCATTTTGGTGGTTGATCCTATGAGTCTGCAATATTTGATCGGC GGAGTGGTCGATTATACCGAAGGTCTCGAAGGCTCAAGATTCTTCGTTAACAACCCCAATGCAACGACCACGTGTGGTTG CGGCGCATCATTTAGCGTCTAA
Upstream 100 bases:
>100_bases AACTCAGGTATTAGATAATCGCCGCCATTATCATTATTAGATCGGCAGCACATCGGATTTTGCGGTGTTGTTGTATTTTC CACGACTGAGAGAGGTCATC
Downstream 100 bases:
>100_bases TCCTGAGATTTTTCAGGAAAATAAGGCCAGTCGATAAACTCGATTGGCCGACGCTGCGTATTAGGATGTCACGCAGCGAT AACAATAAGGAATAGTTATG
Product: iron-sulfur cluster insertion protein ErpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSEVNVPLSFSDAAAKRVKALIAEEENPSLMLRVYITGGGCSGFQYGFTFDETVNEGDTKIENSGVILVVDPMSLQYLIG GVVDYTEGLEGSRFFVNNPNATTTCGCGASFSV
Sequences:
>Translated_113_residues MSEVNVPLSFSDAAAKRVKALIAEEENPSLMLRVYITGGGCSGFQYGFTFDETVNEGDTKIENSGVILVVDPMSLQYLIG GVVDYTEGLEGSRFFVNNPNATTTCGCGASFSV >Mature_112_residues SEVNVPLSFSDAAAKRVKALIAEEENPSLMLRVYITGGGCSGFQYGFTFDETVNEGDTKIENSGVILVVDPMSLQYLIGG VVDYTEGLEGSRFFVNNPNATTTCGCGASFSV
Specific function: Required for insertion of 4Fe-4S clusters for at least ispG
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family
Homologues:
Organism=Homo sapiens, GI160420328, Length=86, Percent_Identity=46.5116279069767, Blast_Score=80, Evalue=5e-16, Organism=Homo sapiens, GI52426768, Length=106, Percent_Identity=29.2452830188679, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI1786351, Length=111, Percent_Identity=75.6756756756757, Blast_Score=181, Evalue=1e-47, Organism=Escherichia coli, GI1788877, Length=110, Percent_Identity=40, Blast_Score=67, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=39.8148148148148, Blast_Score=77, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25146411, Length=113, Percent_Identity=28.3185840707965, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193209025, Length=109, Percent_Identity=29.3577981651376, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323001, Length=106, Percent_Identity=36.7924528301887, Blast_Score=72, Evalue=1e-14, Organism=Drosophila melanogaster, GI24649697, Length=109, Percent_Identity=37.6146788990826, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24642263, Length=107, Percent_Identity=32.7102803738318, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ERPA_VIBC3 (A5F947)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F947 - SMR: A5F947 - STRING: A5F947 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0156 - eggNOG: COG0316 - HOGENOM: HBG730174 - OMA: TFDDQIN - ProtClustDB: PRK13623 - BioCyc: VCHO345073:VC0395_A0156-MONOMER - HAMAP: MF_01380 - InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 - Gene3D: G3DSA:2.60.300.12 - PANTHER: PTHR10072 - TIGRFAMs: TIGR00049
Pfam domain/function: PF01521 Fe-S_biosyn; SSF89360 HesB_yadR_yfhF-like
EC number: NA
Molecular weight: Translated: 12018; Mature: 11886
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVNVPLSFSDAAAKRVKALIAEEENPSLMLRVYITGGGCSGFQYGFTFDETVNEGDTK CCCCCCCEEECHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCE IENSGVILVVDPMSLQYLIGGVVDYTEGLEGSRFFVNNPNATTTCGCGASFSV ECCCCEEEEECCCCHHHHHCCHHHHCCCCCCCEEEEECCCCCEEECCCCCCCC >Mature Secondary Structure SEVNVPLSFSDAAAKRVKALIAEEENPSLMLRVYITGGGCSGFQYGFTFDETVNEGDTK CCCCCCEEECHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCE IENSGVILVVDPMSLQYLIGGVVDYTEGLEGSRFFVNNPNATTTCGCGASFSV ECCCCEEEEECCCCHHHHHCCHHHHCCCCCCCEEEEECCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA