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The map label for this gene is rseA [H]

Identifier: 147673480

GI number: 147673480

Start: 2201695

End: 2202333

Strand: Reverse

Name: rseA [H]

Synonym: VC0395_A2044

Alternate gene names: 147673480

Gene position: 2202333-2201695 (Counterclockwise)

Preceding gene: 147675349

Following gene: 147674099

Centisome position: 72.83

GC content: 49.77

Gene sequence:

>639_bases
ATGACTATGGTGAATAGAATGGCTGACAAAGAAAAACTTTCAGCACTCATGGATGGCGAGATGATCGACAATGAGCTGAT
TTTAGGATTGGCTCAGGATCAAGATGCACGTGACACGTGGAAAAACTATCATCTGATCGGTGATGTACTCCGTGGAGAGG
CACCGATTCACAAAGAATGGAATATCGCTGAAAGTGTCGCCTTGGCGCTGGAAAATGAACCTGCGCACAATCCGCTACAC
CACTCAACGAACGTGATTGACTTGCAACAGGCAAGACTGGAAGCGCAGCCTAAACCGCAACAGGCTAAACGTCAGTTGCC
TGCTTGGTTGTCTCAGTTTGGTCAAGTCGGTATCGCCGCTTGTGTCTCGTTGGCGGTTATTTTCGGCGTACAACAGTATG
GCGGACAAAGCTCAGGCGTGGAAAATGAACTGCCTGTGCTGCAAACCATTCCTCTTGCTGGAAGCGCTGAGCCAGTGAGT
TTGACTCGTGATTCGGTGGAAAAGCATGCGCCAGACAGCAGCATGCAAGAGCAACGTCGCCGCGTAAACGCCTTGCTGCA
GGACTACGAACTGCAATTACGCCTAAACAGTGAGAATAGTGCTTCTCACCAACACCCAGTTGAATCGGTTGTGGAATGA

Upstream 100 bases:

>100_bases
GTGATGGATTGCCCTGTTGGTACAGTGCGTTCACGAATTTTCCGCGCTCGTGAGGCGGTAGAGAAGAAAATCAAACCTCT
TCTGTAACGCAAATTCCGTA

Downstream 100 bases:

>100_bases
AGAAACTTTTGATCAGTGCGCTGACACTGTTCTGTGTAAATTCAACTACCGCCTTTGCAGAGGCGTTGTTGTATCAGATG
AATGAAGCCAGCCAACATCT

Product: sigma-E factor negative regulatory protein RseA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTMVNRMADKEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALALENEPAHNPLH
HSTNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAACVSLAVIFGVQQYGGQSSGVENELPVLQTIPLAGSAEPVS
LTRDSVEKHAPDSSMQEQRRRVNALLQDYELQLRLNSENSASHQHPVESVVE

Sequences:

>Translated_212_residues
MTMVNRMADKEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALALENEPAHNPLH
HSTNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAACVSLAVIFGVQQYGGQSSGVENELPVLQTIPLAGSAEPVS
LTRDSVEKHAPDSSMQEQRRRVNALLQDYELQLRLNSENSASHQHPVESVVE
>Mature_211_residues
TMVNRMADKEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEWNIAESVALALENEPAHNPLHH
STNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAACVSLAVIFGVQQYGGQSSGVENELPVLQTIPLAGSAEPVSL
TRDSVEKHAPDSSMQEQRRRVNALLQDYELQLRLNSENSASHQHPVESVVE

Specific function: Negative regulator of rpoE [H]

COG id: COG3073

COG function: function code T; Negative regulator of sigma E activity

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseA family [H]

Homologues:

Organism=Escherichia coli, GI1788925, Length=197, Percent_Identity=45.1776649746193, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005573
- InterPro:   IPR005572 [H]

Pfam domain/function: PF03873 RseA_C; PF03872 RseA_N [H]

EC number: NA

Molecular weight: Translated: 23495; Mature: 23363

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMVNRMADKEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEW
CCHHHHHHHHHHHHHHHCCHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
NIAESVALALENEPAHNPLHHSTNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAA
CHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CVSLAVIFGVQQYGGQSSGVENELPVLQTIPLAGSAEPVSLTRDSVEKHAPDSSMQEQRR
HHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
RVNALLQDYELQLRLNSENSASHQHPVESVVE
HHHHHHHCCEEEEEECCCCCCCCCCHHHHHCC
>Mature Secondary Structure 
TMVNRMADKEKLSALMDGEMIDNELILGLAQDQDARDTWKNYHLIGDVLRGEAPIHKEW
CHHHHHHHHHHHHHHHCCHHHCCHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
NIAESVALALENEPAHNPLHHSTNVIDLQQARLEAQPKPQQAKRQLPAWLSQFGQVGIAA
CHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
CVSLAVIFGVQQYGGQSSGVENELPVLQTIPLAGSAEPVSLTRDSVEKHAPDSSMQEQRR
HHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHH
RVNALLQDYELQLRLNSENSASHQHPVESVVE
HHHHHHHCCEEEEEECCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]