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The map label for this gene is ycaR [C]

Identifier: 147673931

GI number: 147673931

Start: 1573813

End: 1573992

Strand: Reverse

Name: ycaR [C]

Synonym: VC0395_A1467

Alternate gene names: 147673931

Gene position: 1573992-1573813 (Counterclockwise)

Preceding gene: 147674626

Following gene: 147673188

Centisome position: 52.05

GC content: 48.33

Gene sequence:

>180_bases
ATGGATCACCGTCTGCTTGAAATCGTCGCTTGCCCAGTATGTAAAGGTAAGCTGACTTACGATAAAGATCGCCAAGAGCT
GATTTGTAAGCTGGATCGTCTGGCTTATCCCATTAAAGAAGGCATTCCGGTGCTTTTAGAGCCGGAAGCTCGCAGCATGA
GCATGGATGAGGGACGCTAA

Upstream 100 bases:

>100_bases
TTTGCCCAGCCAAATTGGTGGTATCTGCCCGTTTCGGCTCAGTTTGCTCCAGAAGCGGAGCAGCGTATTGTGGACAAAAT
TAAAGAGGTAATGGAACCGT

Downstream 100 bases:

>100_bases
TGTCATTTACTGTCGTGATCCCTGCGCGTTACCAATCCACGCGCTTACCGGGTAAGCCTCTCGCCGATATTGGCGGTAAG
CCAATGATTCAGTGGGTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MDHRLLEIVACPVCKGKLTYDKDRQELICKLDRLAYPIKEGIPVLLEPEARSMSMDEGR

Sequences:

>Translated_59_residues
MDHRLLEIVACPVCKGKLTYDKDRQELICKLDRLAYPIKEGIPVLLEPEARSMSMDEGR
>Mature_59_residues
MDHRLLEIVACPVCKGKLTYDKDRQELICKLDRLAYPIKEGIPVLLEPEARSMSMDEGR

Specific function: Unknown

COG id: COG2835

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0434 family [H]

Homologues:

Organism=Escherichia coli, GI1787146, Length=59, Percent_Identity=67.7966101694915, Blast_Score=93, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005651 [H]

Pfam domain/function: PF03966 Trm112p [H]

EC number: NA

Molecular weight: Translated: 6788; Mature: 6788

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHRLLEIVACPVCKGKLTYDKDRQELICKLDRLAYPIKEGIPVLLEPEARSMSMDEGR
CCCHHEEEHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MDHRLLEIVACPVCKGKLTYDKDRQELICKLDRLAYPIKEGIPVLLEPEARSMSMDEGR
CCCHHEEEHCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA